RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 RUNX3Q13761 415 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 LASP1Q14847 261 aaKnown RBP4.84□□□□□ -1.63
SMC5-203ENST00000475540 TAF7Q15545 349 aaPredicted RBP4.84□□□□□ -1.63
SMC5-203ENST00000475540 Q1RN00 199 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 IQCCQ4KMZ1 466 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 VWA2Q5GFL6 755 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 TOR1AIP1Q5JTV8 583 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 LIPJQ5W064 366 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 ARMCX5Q6P1M9 558 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 PEX5LQ8IYB4 626 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 BEST4Q8NFU0 473 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 GANCQ8TET4 914 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 ERGIC2Q96RQ1 377 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 SLC5A7Q9GZV3 580 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 LIME1Q9H400 295 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 ZNF665Q9H7R5 613 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 SRD5A3Q9H8P0 318 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 TMEM161AQ9NX61 479 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 ZNF318Q5VUA4 2279 aa4.84□□□□□ -1.64
SMC5-203ENST00000475540 POGZQ7Z3K3 1410 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 MAGEB16A2A368 324 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 GUCA1CO95843 209 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 HSD17B7P56937 341 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 STARD6P59095 220 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 ASIC1P78348 528 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 RNF212Q495C1 297 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 AGAP6Q5VW22 663 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 PODNL1Q6PEZ8 512 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 SIGLEC15Q6ZMC9 328 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 ZNF730Q6ZMV8 503 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 RABEPKQ7Z6M1 372 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 SERINC5Q86VE9 423 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 KLHL30-AS1Q8NEE0 82 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 SERAC1Q96JX3 654 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 C16orf45Q96MC5 204 aaPredicted RBP4.83□□□□□ -1.64
SMC5-203ENST00000475540 TSGA13Q96PP4 275 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 CUTCQ9NTM9 273 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 IL19Q9UHD0 177 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 SH3BGRL2Q9UJC5 107 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 FBXO7Q9Y3I1 522 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 NAALAD2Q9Y3Q0 740 aa4.83□□□□□ -1.64
SMC5-203ENST00000475540 GON4LQ3T8J9 2241 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 FER1L5A0AVI2 2057 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 UMODL1Q5DID0 1318 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 RNF103-CHMP3A0A140T963 221 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 FRAT2O75474 233 aaPredicted RBP4.82□□□□□ -1.64
SMC5-203ENST00000475540 VENTXO95231 258 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 GSTA2P09210 222 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 HMOX1P09601 288 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 GJB2P29033 226 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 ID1P41134 155 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 YBEYP58557 167 aaPredicted RBP4.82□□□□□ -1.64
SMC5-203ENST00000475540 POLR2FP61218 127 aaKnown RBP4.82□□□□□ -1.64
SMC5-203ENST00000475540 PPIAP62937 165 aaKnown RBP4.82□□□□□ -1.64
SMC5-203ENST00000475540 SLC34A1Q06495 639 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 ARHGAP1Q07960 439 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 NPRL3Q12980 569 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 ACKR1Q16570 336 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 FUT11Q495W5 492 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 REP15Q6BDI9 236 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 HDDC3Q8N4P3 179 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 CD177Q8N6Q3 437 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 ZNRF1Q8ND25 227 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 TCP11Q8WWU5 503 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 TUFT1Q9NNX1 390 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 ANO10Q9NW15 660 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 SEPT10Q9P0V9 454 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 ABCD2Q9UBJ2 740 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 FBXL5Q9UKA1 691 aa4.82□□□□□ -1.64
SMC5-203ENST00000475540 CROCCQ5TZA2 2017 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 SYT7O43581 403 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 OR6A2O95222 327 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 C8orf89P0DMQ9 161 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 BRCC3P46736 316 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 CCL14Q16627 93 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 SLC39A12Q504Y0 691 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 LRRC38Q5VT99 294 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 SNRNP48Q6IEG0 339 aaKnown RBP4.81□□□□□ -1.64
SMC5-203ENST00000475540 GALNT17Q6IS24 598 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 TMEM270Q6UE05 265 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 SAMD12Q8N8I0 201 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 TEKT1Q969V4 418 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 CDKN2AIPNLQ96HQ2 116 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 LRRC2Q9BYS8 371 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 TMEM206Q9H813 350 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 NT5DC2Q9H857 520 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 TNFRSF19Q9NS68 423 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 PLEK2Q9NYT0 353 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 CNIH4Q9P003 139 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 XPO7Q9UIA9 1087 aaKnown RBP4.81□□□□□ -1.64
SMC5-203ENST00000475540 EXOC6BQ9Y2D4 811 aa4.81□□□□□ -1.64
SMC5-203ENST00000475540 TRIM64CA6NLI5 447 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 SRRM4A7MD48 611 aaKnown RBP4.8□□□□□ -1.64
SMC5-203ENST00000475540 ZNF724A8MTY0 619 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 ATP9AO75110 1047 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 FHP07954 510 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 ODC1P11926 461 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 KLK2P20151 261 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 FRKP42685 505 aaPredicted RBP4.8□□□□□ -1.64
SMC5-203ENST00000475540 ALDH3B1P43353 468 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms