RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SOX18P35713 384 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 BUD31P41223 144 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 RAB38P57729 211 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 OR4D2P58180 307 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 SKP1P63208 163 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CCL7P80098 99 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TXNL4AP83876 142 aaKnown RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 EEF1A2Q05639 463 aaKnown RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ZFP36L1Q07352 338 aaKnown RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 RBBP4Q09028 425 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 FADDQ13158 208 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TRA2AQ13595 282 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 FLOT2Q14254 428 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 GRM7Q14831 915 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 RGNQ15493 299 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 FAM214AQ32MH5 1076 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 AASDHQ4L235 1098 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 MTX3Q5HYI7 312 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 AP1ARQ63HQ0 302 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 OR52E8Q6IFG1 317 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ZFP1Q6P2D0 407 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ERICH5Q6P6B1 374 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TLDC1Q6P9B6 456 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 RNF111Q6ZNA4 994 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ZNF621Q6ZSS3 439 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 PRSS41Q7RTY9 318 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 BPHLQ86WA6 291 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 DHFR2Q86XF0 187 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 PTOV1Q86YD1 416 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ZZZ3Q8IYH5 903 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 DTWD1Q8N5C7 304 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TRIML2Q8N7C3 387 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 Q8N9G6 341 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 FAM156AQ8NDB6 213 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 C7orf57Q8NEG2 295 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TNIP2Q8NFZ5 429 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 OR2T12Q8NG77 320 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 OR4A15Q8NGL6 344 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 OR2I1PQ8NGU4 316 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 OR10A6Q8NH74 314 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CDC26Q8NHZ8 85 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 IFI44Q8TCB0 444 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 MIPOL1Q8TD10 442 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 SFXN5Q8TD22 340 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TANKQ92844 425 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 SLCO4A1Q96BD0 722 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 MOAP1Q96BY2 351 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CCDC124Q96CT7 223 aaKnown RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 NEURL3Q96EH8 262 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 AURKBQ96GD4 344 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 KCTD14Q9BQ13 255 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ECSITQ9BQ95 431 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TRIM8Q9BZR9 551 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 SPRTNQ9H040 489 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 GLIPR2Q9H4G4 154 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TMEM38AQ9H6F2 299 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CXorf36Q9H7Y0 433 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 COPS7BQ9H9Q2 264 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ANKHQ9HCJ1 492 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 S100A14Q9HCY8 104 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 OLAHQ9NV23 265 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ARMC1Q9NVT9 282 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 MAGEL2Q9UJ55 1249 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 UTS2RQ9UKP6 389 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 PSME2Q9UL46 239 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 PCDHGB4Q9UN71 923 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 NAALAD2Q9Y3Q0 740 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CLDN16Q9Y5I7 305 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TP53BP1Q12888 1972 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 EP300Q09472 2414 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 MDC1Q14676 2089 aaKnown RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 WDR87Q6ZQQ6 2873 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 A0A087WV62 115 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 CPED1A4D0V7 1026 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 CASC3O15234 703 aaKnown RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 CHST10O43529 356 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 FOXD2O60548 495 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 CTNSO60931 367 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 KRT36O76013 467 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 ANP32DO95626 131 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 KRT75O95678 551 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 LDOC1O95751 146 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 GPR75O95800 540 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 ATP1B1P05026 303 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 EIF2S1P05198 315 aaKnown RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 RPLP0P05388 317 aaKnown RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 GPIP06744 558 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 HOXB6P17509 224 aaKnown RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 ATP6V1B2P21281 511 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 IL10P22301 178 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 TGM1P22735 817 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 CPN2P22792 545 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 SLC7A1P30825 629 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 TLX1P31314 330 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 GALNSP34059 522 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 RORAP35398 523 aa6.22□□□□□ -1.41
ATG4A-207ENST00000474825 CDK9P50750 372 aaKnown RBP6.22□□□□□ -1.41
ATG4A-207ENST00000474825 ARSFP54793 590 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms