RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 IKBIPQ70UQ0 350 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 KBTBD2Q8IY47 623 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 GALNT16Q8N428 558 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 C7orf57Q8NEG2 295 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 PTPMT1Q8WUK0 201 aaPredicted RBP16.95■□□□□ 0.3
SNRPB-203ENST00000474384 TTC9Q92623 222 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 EXOSC8Q96B26 276 aaKnown RBP16.95■□□□□ 0.3
SNRPB-203ENST00000474384 KLHL29Q96CT2 875 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 RBM18Q96H35 190 aaKnown RBP16.95■□□□□ 0.3
SNRPB-203ENST00000474384 DGAT2Q96PD7 388 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 ARHGAP9Q9BRR9 750 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 ADAP2Q9NPF8 381 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 UTS2RQ9UKP6 389 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 LHX6Q9UPM6 363 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 SYNDIG1LA6NDD5 238 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 SAGE2PA6NJ88 616 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 C17orf105B2RV13 164 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 EDF1O60869 148 aaKnown RBP16.94■□□□□ 0.3
SNRPB-203ENST00000474384 DIAPH2O60879 1101 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 SLC35E2P0CK97 266 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 PRPS2P11908 318 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 ICAM2P13598 275 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 ITGA3P26006 1051 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 FEN1P39748 380 aaKnown RBP16.94■□□□□ 0.3
SNRPB-203ENST00000474384 POLE2P56282 527 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 SLC26A5P58743 744 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 ERVK-8P63133 956 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 RAPSNQ13702 412 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 PRSS53Q2L4Q9 553 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 PLAG1Q6DJT9 500 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 NXNQ6DKJ4 435 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 EPGNQ6UW88 154 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 TICAM1Q8IUC6 712 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 ST13P4Q8IZP2 240 aaPredicted RBP16.94■□□□□ 0.3
SNRPB-203ENST00000474384 NFAM1Q8NET5 270 aaPredicted RBP16.94■□□□□ 0.3
SNRPB-203ENST00000474384 DOK4Q8TEW6 326 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 CNRIP1Q96F85 164 aaPredicted RBP16.94■□□□□ 0.3
SNRPB-203ENST00000474384 THOC3Q96J01 351 aaKnown RBP16.94■□□□□ 0.3
SNRPB-203ENST00000474384 MIEF1Q9NQG6 463 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 NOP53Q9NZM5 478 aaKnown RBP16.94■□□□□ 0.3
SNRPB-203ENST00000474384 CLCA3PQ9Y6N3 262 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 ZNF780BQ9Y6R6 833 aa16.94■□□□□ 0.3
SNRPB-203ENST00000474384 OR10H2O60403 315 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 SERPINA7P05543 415 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 FAM87AP0C7U9 286 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 G6PDP11413 515 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 CPMP14384 443 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 PORP16435 677 aaPredicted RBP16.93■□□□□ 0.3
SNRPB-203ENST00000474384 CSNK2A2P19784 350 aaPredicted RBP16.93■□□□□ 0.3
SNRPB-203ENST00000474384 ASMTP46597 345 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 DIO3P55073 304 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 SOX8P57073 446 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 PLIN5Q00G26 463 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 PTGR1Q14914 329 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 EXT1Q16394 746 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 ANKRD26P1Q6NSI1 321 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 LRRC34Q8IZ02 419 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 OR14A16Q8NHC5 309 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 M1APQ8TC57 530 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 THOC1Q96FV9 657 aaKnown RBP16.93■□□□□ 0.3
SNRPB-203ENST00000474384 MAELQ96JY0 434 aaKnown RBP16.93■□□□□ 0.3
SNRPB-203ENST00000474384 OR52B2Q96RD2 323 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 REEP4Q9H6H4 257 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 ASIC5Q9NY37 505 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 EHD3Q9NZN3 535 aa16.93■□□□□ 0.3
SNRPB-203ENST00000474384 CROCCQ5TZA2 2017 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 CEACAM4O75871 244 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 TGDSO95455 350 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 ITGAMP11215 1152 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 COX7A2P14406 83 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 IDH3AP50213 366 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 PGDP52209 483 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 AQP5P55064 265 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 DUSP2Q05923 314 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 TERF2Q15554 542 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 OGFOD2Q6N063 350 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 MORN4Q8NDC4 146 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 B3GNT7Q8NFL0 401 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 FDCSPQ8NFU4 85 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 ACTRT2Q8TDY3 377 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 DAZLQ92904 295 aaKnown RBP16.92■□□□□ 0.3
SNRPB-203ENST00000474384 RIT1Q92963 219 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 ZNF681Q96N22 645 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 PELOQ9BRX2 385 aaKnown RBP16.92■□□□□ 0.3
SNRPB-203ENST00000474384 LHPPQ9H008 270 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 MMP25Q9NPA2 562 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 SLC35C2Q9NQQ7 365 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 TAS2R7Q9NYW3 318 aa16.92■□□□□ 0.3
SNRPB-203ENST00000474384 PIEZO2Q9H5I5 2752 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 GABRR3A8MPY1 467 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 HRKO00198 91 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 VIMP08670 466 aaKnown RBP16.91■□□□□ 0.3
SNRPB-203ENST00000474384 ALDOCP09972 364 aaKnown RBP16.91■□□□□ 0.3
SNRPB-203ENST00000474384 PTGER1P34995 402 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 GPR143P51810 404 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 MYBPC3Q14896 1274 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 LSM12Q3MHD2 195 aaKnown RBP16.91■□□□□ 0.3
SNRPB-203ENST00000474384 IRAK1BP1Q5VVH5 260 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 SPATA19Q7Z5L4 167 aa16.91■□□□□ 0.3
SNRPB-203ENST00000474384 CCDC116Q8IYX3 515 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms