RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 XGP55808 180 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 DLX5P56178 289 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 SNRPD1P62314 119 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 CYCSP99999 105 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 KRT81Q14533 505 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 KIAA1161Q6NSJ0 714 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 LRRC8BQ6P9F7 803 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 TMEM26Q6ZUK4 368 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 C5orf24Q7Z6I8 188 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 PDCL2Q8N4E4 241 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 OR6F1Q8NGZ6 308 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 GIPC3Q8TF64 312 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 TMEM45BQ96B21 275 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF524Q96C55 264 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 INPP4AQ96PE3 977 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 KRT12Q99456 494 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 TPPP3Q9BW30 176 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 PINK1Q9BXM7 581 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 TSPY26PQ9H489 355 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 KCNK13Q9HB14 408 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF71Q9NQZ8 489 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 FAM212BQ9NTI7 297 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 AATFQ9NY61 560 aaKnown RBP eCLIP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 KLK11Q9UBX7 282 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 ICAM5Q9UMF0 924 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 DIMT1Q9UNQ2 313 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 LRPPRCP42704 1394 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 MAPK8IP3Q9UPT6 1336 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 WIZO95785 1651 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 MROH2BQ7Z745 1585 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 ARAP1Q96P48 1450 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 ROCK2O75116 1388 aaKnown RBP3.69□□□□□ -1.82
BRCA1-212ENST00000473961 C15orf61A6NNL5 157 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 LMO7DNF2Z398 122 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 INPP4BO15327 924 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 SIGLEC5O15389 551 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 B4GAT1O43505 415 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 VPS26AO75436 327 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 IGHEP01854 428 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 MYOGP15173 224 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 CEBPBP17676 345 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 GLRA1P23415 457 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 LEPRP48357 1165 aaKnown RBP3.69□□□□□ -1.82
BRCA1-212ENST00000473961 NAPAP54920 295 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 NLRP11P59045 1033 aaKnown RBP3.69□□□□□ -1.82
BRCA1-212ENST00000473961 MTHFSDQ2M296 383 aaKnown RBP3.69□□□□□ -1.82
BRCA1-212ENST00000473961 HLA-BQ31612 363 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 AGKQ53H12 422 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 FFAR4Q5NUL3 377 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 GALNT17Q6IS24 598 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 ZCCHC12Q6PEW1 402 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 Q6ZRG5 221 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 GOLGA7Q7Z5G4 137 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 SLC22A16Q86VW1 577 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 CACUL1Q86Y37 369 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 DND1Q8IYX4 353 aaKnown RBP3.69□□□□□ -1.82
BRCA1-212ENST00000473961 CNPY4Q8N129 248 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 CIARTQ8N365 385 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-212ENST00000473961 PARP8Q8N3A8 854 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF843Q8N446 348 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 GVQW1Q8N7I0 195 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 BCORP1Q8N888 145 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 OR9Q2Q8NGE9 314 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 OR52B4Q8NGK2 314 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 CD99L2Q8TCZ2 262 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 GPR148Q8TDV2 347 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 CHPT1Q8WUD6 406 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 SELENOMQ8WWX9 145 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 TMEM37Q8WXS4 190 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 C2orf48Q96LS8 159 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 RAB40CQ96S21 281 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 PIGQQ9BRB3 760 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 DCTN5Q9BTE1 182 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF416Q9BWM5 594 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 CARD6Q9BX69 1037 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 COQ10BQ9H8M1 238 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 NMUR1Q9HB89 426 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 POLD4Q9HCU8 107 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 NLGN3Q9NZ94 848 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 IL20RAQ9UHF4 553 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 PPP1R3CQ9UQK1 317 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 RNF215Q9Y6U7 377 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 UACAQ9BZF9 1416 aa3.69□□□□□ -1.82
BRCA1-212ENST00000473961 FGD5Q6ZNL6 1462 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 BRD4O60885 1362 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 A0A1B0GWJ7 208 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 TMEM89A2RUT3 159 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ANKRD30BLA7E2S9 258 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 MEI4A8MW99 385 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 MAPK13O15264 365 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 MAGEC1O60732 1142 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ANXA9O76027 345 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ANGPTL1O95841 491 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 UMODP07911 640 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 TSPY4P0CV99 314 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 TSPY10P0CW01 314 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 CEACAM1P13688 526 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 NCF1P14598 390 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 PRDX6P30041 224 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 PRDX2P32119 198 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms