RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 WDR45BQ5MNZ6 344 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 SAXO2Q658L1 398 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 REEP3Q6NUK4 255 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 ERAP2Q6P179 960 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 SLC7A13Q8TCU3 470 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CRELD1Q96HD1 420 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 F2RL3Q96RI0 385 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 MAPKAP1Q9BPZ7 522 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 MVB12BQ9H7P6 319 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CCDC177Q9NQR7 707 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 EHD3Q9NZN3 535 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CNOT2Q9NZN8 540 aaKnown RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 ICKQ9UPZ9 632 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 ANGPT4Q9Y264 503 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 SNRNP200O75643 2136 aaKnown RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 NUMA1Q14980 2115 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 HEPACAM2A8MVW5 462 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 HMGN4O00479 90 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 AP3D1O14617 1153 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 RGS13O14921 159 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 POP7O75817 140 aaKnown RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 RHOP08100 348 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CASP3P42574 277 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 HSPB3Q12988 150 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 NXNL2Q5VZ03 156 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 SIGIRRQ6IA17 410 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 TAGAPQ8N103 731 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 IQCF1Q8N6M8 205 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 IL17RDQ8NFM7 739 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 ARRDC3Q96B67 414 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 TM4SF18Q96CE8 201 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 OTUB1Q96FW1 271 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 YME1L1Q96TA2 773 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CNPPD1Q9BV87 410 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 MOV10Q9HCE1 1003 aaKnown RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 TM7SF3Q9NS93 570 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 RABL2AQ9UBK7 228 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 MUTYHQ9UIF7 546 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 MYO10Q9HD67 2058 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 LOC105371267A0A1B0GV96 52 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 SH3D21A4FU49 640 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 ARRDC5A6NEK1 342 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 EFCAB10A6NFE3 127 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 ANKDD1BA6NHY2 528 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 PRRT4C9JH25 899 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 TLR4O00206 839 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 MMP20O60882 483 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 CYP7B1O75881 506 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 SRPRAP08240 638 aaKnown RBP10.38□□□□□ -0.75
C9orf3-214ENST00000473778 CISD3P0C7P0 127 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 UQCRC2P22695 453 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 TNFSF8P32971 234 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 CRYBB2P43320 205 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 ALDH9A1P49189 494 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 OLR1P78380 273 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 PRAMEF14Q5SWL7 426 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 PRAMEF13Q5VWM6 474 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 RAET1GQ6H3X3 334 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 CCDC149Q6ZUS6 474 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 AKAP14Q86UN6 197 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 PLA2G15Q8NCC3 412 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 FAM46DQ8NEK8 389 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 SUN5Q8TC36 379 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 ING5Q8WYH8 240 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 NEURL3Q96EH8 262 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 NEDD4LQ96PU5 975 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 TRNT1Q96Q11 434 aaKnown RBP10.38□□□□□ -0.75
C9orf3-214ENST00000473778 GPA33Q99795 319 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 FUZQ9BT04 418 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 CFHR5Q9BXR6 569 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 HOXD1Q9GZZ0 328 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 OR52A5Q9H2C5 316 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 MARCH7Q9H992 704 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 ZDHHC4Q9NPG8 344 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 TEX10Q9NXF1 929 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-214ENST00000473778 SLC23A2Q9UGH3 650 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 SATB2Q9UPW6 733 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 A0A0G2JN53 185 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 CENPBD1B2RD01 187 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 ANHXE9PGG2 379 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 TMPRSS11DO60235 418 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 TPST2O60704 377 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 TPPPO94811 219 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 EPPINO95925 133 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 SCG5P05408 212 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 C6P13671 934 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 OSMP13725 252 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 DDCP20711 480 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 BSGP35613 385 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 EPHA5P54756 1037 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 PIN1Q13526 163 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-214ENST00000473778 ZNF79Q15937 498 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 SYPL1Q16563 259 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 LRRC26Q2I0M4 334 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 PGBD2Q6P3X8 592 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 DEF8Q6ZN54 512 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 RFPL4BQ6ZWI9 263 aa10.38□□□□□ -0.75
C9orf3-214ENST00000473778 GET4Q7L5D6 327 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms