RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ZNF548Q8NEK5 533 aaPredicted RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 OR2AK2Q8NG84 335 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 OR52I2Q8NH67 350 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 C16orf52Q8NHV5 167 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 BBS10Q8TAM1 723 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TMEM255BQ8WV15 326 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 APOBEC4Q8WW27 367 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 SMPDL3BQ92485 455 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PRCCQ92733 491 aaPredicted RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 TANKQ92844 425 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 RIT1Q92963 219 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PHF21AQ96BD5 680 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 RHBDF1Q96CC6 855 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 EEF2KMTQ96G04 330 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ATXN7L3BQ96GX2 97 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 C16orf45Q96MC5 204 aaPredicted RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 GFI1Q99684 422 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SLC25A33Q9BSK2 321 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SPXQ9BT56 116 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 URM1Q9BTM9 101 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 NACAP1Q9BZK3 213 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 NAPBQ9H115 298 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ABCG4Q9H172 646 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 C1orf21Q9H246 121 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CPVLQ9H3G5 476 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SRD5A3Q9H8P0 318 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 RNF121Q9H920 327 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TRPC7Q9HCX4 862 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 MYNNQ9NPC7 610 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ECHDC1Q9NTX5 307 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ANO10Q9NW15 660 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 HPF1Q9NWY4 346 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 OSER1Q9NX31 292 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PTTG2Q9NZH5 202 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PKD2L2Q9NZM6 624 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CNIH4Q9P003 139 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 FETUBQ9UGM5 382 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TINAGQ9UJW2 476 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 MYO6Q9UM54 1294 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 RUVBL2Q9Y230 463 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 TDRKHQ9Y2W6 561 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 JRKLQ9Y4A0 524 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PLIN4Q96Q06 1357 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ZNF532Q9HCE3 1301 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PRRC2CQ9Y520 2896 aaKnown RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 SONP18583 2426 aaKnown RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 CNTRLQ7Z7A1 2325 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 NOTCH3Q9UM47 2321 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 CACNA1CQ13936 2221 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 A0A1W2PRB8 838 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 OR5K3A6NET4 321 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 NEMP2A6NFY4 417 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 DUXAA6NLW8 204 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 PRRG1O14668 218 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 CPLX1O14810 134 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 NVLO15381 856 aaKnown RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 TTI1O43156 1089 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 ZNHIT1O43257 154 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 LRRTM2O43300 516 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 TXNL1O43396 289 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 SNX3O60493 162 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 NMT2O60551 498 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 SELENOFO60613 162 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 ZG16O60844 167 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 SEC22BO75396 215 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GMNNO75496 209 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 BCAS2O75934 225 aaPredicted RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 GAGE7O76087 117 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GCNT3O95395 438 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 SEC24AO95486 1093 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 PLGP00747 810 aaPredicted RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 IGHV2-70P01814 119 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 LIPFP07098 398 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GAGE12FP0CL80 117 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GAGE12GP0CL81 117 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GAGE12IP0CL82 117 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 HOXB2P14652 356 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 DARSP14868 501 aaKnown RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 ARF4P18085 180 aaPredicted RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 CYP11B2P19099 503 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 PIK3R1P27986 724 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 HTR1EP28566 365 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 CCND2P30279 289 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 SSTR1P30872 391 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 OPRD1P41143 372 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 TNFRSF4P43489 277 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 PCYT1AP49585 367 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 COMPP49747 757 aaPredicted RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 LUMP51884 338 aaPredicted RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 BPIFB3P59826 476 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 PTENP60484 403 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GMFBP60983 142 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 ISL1P61371 349 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 AKAP17AQ02040 695 aaKnown RBP2.16□□□□□ -2.06
CALD1-216ENST00000473714 SULT2A1Q06520 285 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 DMPKQ09013 629 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 TWF1Q12792 350 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 ABRQ12979 859 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GAGE1Q13065 139 aa2.16□□□□□ -2.06
CALD1-216ENST00000473714 GAGE4Q13068 117 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms