RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	PPP2R1A	P30153	589 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	CCND2	P30279	289 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	SLC6A8	P48029	635 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	TRADD	Q15628	312 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	HAGH	Q16775	308 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	SHROOM1	Q2M3G4	852 aa	Predicted RBP	3.89	□□□□□ -1.79
BBX-223	ENST00000473542	FASTKD1	Q53R41	847 aa	Known RBP	3.89	□□□□□ -1.79
BBX-223	ENST00000473542	FAM182A	Q5T1J6	154 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	ZC2HC1B	Q5TFG8	222 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	OR6B2	Q6IFH4	312 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	RHBDD2	Q6NTF9	364 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	ZNF613	Q6PF04	617 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	ZNF730	Q6ZMV8	503 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	WDR88	Q6ZMY6	472 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	GDPGP1	Q6ZNW5	385 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542		Q6ZRG5	221 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	GPR142	Q7Z601	462 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	ADCK1	Q86TW2	530 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	CARM1	Q86X55	608 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	ERC1	Q8IUD2	1116 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	WDR49	Q8IV35	697 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	PARP8	Q8N3A8	854 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	RDH11	Q8TC12	318 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	MRPL38	Q96DV4	380 aa	Known RBP	3.89	□□□□□ -1.79
BBX-223	ENST00000473542	CAPNS2	Q96L46	248 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	CXorf58	Q96LI9	332 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	SAMD8	Q96LT4	415 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	LINC00479	Q96M42	142 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	NMNAT2	Q9BZQ4	307 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	KRT23	Q9C075	422 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	SCRT2	Q9NQ03	307 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	HPS4	Q9NQG7	708 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	ACTR3B	Q9P1U1	418 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	EPS15L1	Q9UBC2	864 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	COPS7A	Q9UBW8	275 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	ASIC3	Q9UHC3	531 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	BAIAP2L1	Q9UHR4	511 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	NPC1L1	Q9UHC9	1359 aa		3.89	□□□□□ -1.79
BBX-223	ENST00000473542	RAD54L2	Q9Y4B4	1467 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	DCX	O43602	365 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	ZG16	O60844	167 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	CS	O75390	466 aa	Known RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	REC8	O95072	547 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	TRIM16	O95361	564 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	GP9	P14770	177 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	EZR	P15311	586 aa	Known RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	SELE	P16581	610 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	CD86	P42081	329 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	ACADSB	P45954	432 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	RABIF	P47224	123 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	NDST1	P52848	882 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	NFATC2	Q13469	925 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	LY6D	Q14210	128 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	FASTK	Q14296	549 aa	Known RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	MS4A18	Q3C1V0	323 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	KRT71	Q3SY84	523 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	C12orf60	Q5U649	245 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	IL23R	Q5VWK5	629 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	NEPRO	Q6NW34	567 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	CWC27	Q6UX04	472 aa	Known RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	YRDC	Q86U90	279 aa	Known RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	PHC2	Q8IXK0	858 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	RNF148	Q8N7C7	305 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	FAM71C	Q8NEG0	241 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	OR52B6	Q8NGF0	335 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	LRRC15	Q8TF66	581 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	MRPL24	Q96A35	216 aa	Known RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	MOCOS	Q96EN8	888 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	ATXN7L3B	Q96GX2	97 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	SIRPD	Q9H106	197 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	UPF3A	Q9H1J1	476 aa	Known RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	FAM124B	Q9H5Z6	455 aa	Predicted RBP	3.88	□□□□□ -1.79
BBX-223	ENST00000473542	HPF1	Q9NWY4	346 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	THYN1	Q9P016	225 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	ENTPD4	Q9Y227	616 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542	ATG4B	Q9Y4P1	393 aa		3.88	□□□□□ -1.79
BBX-223	ENST00000473542		A0A0U1RRA0	63 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	SH3PXD2B	A1X283	911 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	MEI4	A8MW99	385 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	TXNL1	O43396	289 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	BUB1	O43683	1085 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	IDH3B	O43837	385 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	SOCS5	O75159	536 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	B3GALNT1	O75752	331 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	TGFA	P01135	160 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	CGA	P01215	116 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	IGHG1	P01857	330 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	MBL2	P11226	248 aa	Predicted RBP	3.87	□□□□□ -1.79
BBX-223	ENST00000473542	DNAJB1	P25685	340 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	MAGEA4	P43358	317 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	SLC1A6	P48664	564 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	GPC3	P51654	580 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	RPL27	P61353	136 aa	Known RBP	3.87	□□□□□ -1.79
BBX-223	ENST00000473542	IRX1	P78414	480 aa	Predicted RBP	3.87	□□□□□ -1.79
BBX-223	ENST00000473542	SRPX	P78539	464 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	HTD2	P86397	168 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	NME3	Q13232	169 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	SNX1	Q13596	522 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	SLC17A1	Q14916	467 aa		3.87	□□□□□ -1.79
BBX-223	ENST00000473542	NECTIN1	Q15223	517 aa		3.87	□□□□□ -1.79

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