RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GPR156Q8NFN8 814 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 BBS10Q8TAM1 723 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 C1GALT1C1Q96EU7 318 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ZBED6CLQ96FA7 236 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 RNF170Q96K19 258 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ZNF514Q96K75 400 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 TTYH2Q9BSA4 534 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 C11orf54Q9H0W9 315 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 RNF167Q9H6Y7 350 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 RANBP3Q9H6Z4 567 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 CACYBPQ9HB71 228 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 MED17Q9NVC6 651 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ASB6Q9NWX5 421 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 SPIN1Q9Y657 262 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 MKI67P46013 3256 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 VCANP13611 3396 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 VWA8A3KMH1 1905 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 PRAMEF33A0A0G2JMD5 474 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 A0A1W2PRQ8 180 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CASKO14936 926 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PDPK1O15530 556 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PRAMEF10O60809 474 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ITGA10O75578 1167 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 OR2B3O76000 313 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 B3GALT4O96024 378 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 C1SP09871 688 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 POU2F1P14859 743 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SELPP16109 830 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ZNF8P17098 575 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 AZGP1P25311 298 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 ELAVL4P26378 380 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 NNMTP40261 264 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PRLHRP49683 370 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 STK19P49842 368 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 ACLYP53396 1101 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CLDN20P56880 219 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PTSQ03393 145 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 DSG2Q14126 1118 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 GANABQ14697 944 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 SEC23BQ15437 767 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 BAK1Q16611 211 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 WSCD2Q2TBF2 565 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 MINDY4Q4G0A6 757 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 KLHL12Q53G59 568 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ZNF628Q5EBL2 1059 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PRAMEF8Q5VWM4 474 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PRAMEF7Q5VXH5 474 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 NXNL2Q5VZ03 156 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CEACAM20Q6UY09 585 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 GDPD4Q6W3E5 623 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 FAM83HQ6ZRV2 1179 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 HTR3DQ70Z44 454 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TSPAN33Q86UF1 283 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 C11orf74Q86VG3 221 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 GPR65Q8IYL9 337 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 LRRC17Q8N6Y2 441 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 OR6K2Q8NGY2 324 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.82□□□□□ -1.482e-10■■■■■ 28.1
HERC4-209ENST00000473533 SMG7Q92540 1137 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 MOAP1Q96BY2 351 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 LRIG1Q96JA1 1093 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 IL4I1Q96RQ9 567 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PCBD2Q9H0N5 130 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ABCG8Q9H221 673 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ANKRD19PQ9H560 264 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 DNAJC27Q9NZQ0 273 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 COPZ2Q9P299 210 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SEC14L3Q9UDX4 400 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 NUFIP1Q9UHK0 495 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 MUTYHQ9UIF7 546 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 KLF15Q9UIH9 416 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SLC13A4Q9UKG4 626 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SNX11Q9Y5W9 270 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TMEM229AB2RXF0 380 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 WASH3PC4AMC7 463 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 H3BM21 787 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PRRG1O14668 218 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CASC3O15234 703 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 LYRM1O43325 122 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ZNF780AO75290 641 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 RPN2P04844 631 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SRCP12931 536 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CD22P20273 847 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SOX3P41225 446 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 KCNJ5P48544 419 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 AP2S1P53680 142 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 RRAS2P62070 204 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 TRA2BP62995 288 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 BDH1Q02338 343 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ACSM1Q08AH1 577 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SREBF2Q12772 1141 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 LMAN2Q12907 356 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SLBPQ14493 270 aaKnown RBP eCLIP5.82□□□□□ -1.48
HERC4-209ENST00000473533 SLC5A12Q1EHB4 618 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CRTC2Q53ET0 693 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 LIPKQ5VXJ0 399 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SAXO2Q658L1 398 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 Q8N402 240 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TCEANCQ8N8B7 351 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TOR1AIP2Q8NFQ8 470 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms