RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 IMPDH1P20839 514 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 NT5EP21589 574 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 TNFRSF8P28908 595 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 BSGP35613 385 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 HSD17B3P37058 310 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 MEOX1P50221 254 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 GPR143P51810 404 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 GPR85P60893 370 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ERVK-8P63133 956 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF267Q14586 743 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 CCDC153Q494R4 210 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 SPDYAQ5MJ70 313 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF468Q5VIY5 522 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 LETMD1Q6P1Q0 360 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 RNF111Q6ZNA4 994 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 CDC26Q8NHZ8 85 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 SLC22A8Q8TCC7 542 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 DOK4Q8TEW6 326 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 PTPMT1Q8WUK0 201 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 RIT1Q92963 219 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ANKRD9Q96BM1 317 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 SCMH1Q96GD3 660 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 TMEM237Q96Q45 408 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 SLX1AQ9BQ83 275 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 FAIM2Q9BWQ8 316 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 DDX31Q9H8H2 851 aaKnown RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 FARSBQ9NSD9 589 aaKnown RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 MYOTQ9UBF9 498 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ERRFI1Q9UJM3 462 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 GRID1Q9ULK0 1009 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 ERVK-19Q9WJR5 959 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 PCDHGB6Q9Y5F9 930 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 PRRC2CQ9Y520 2896 aaKnown RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 FREM3P0C091 2139 aa10.72□□□□□ -0.69
CPNE1-222ENST00000473373 SPTBN1Q01082 2364 aaKnown RBP10.72□□□□□ -0.69
CPNE1-222ENST00000473373 GNG14A0A1W2PPG7 69 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 GOLGA6L10A6NI86 522 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 ACOT7O00154 380 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 TMPRSS11DO60235 418 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 PRKNO60260 465 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 NME2P1O60361 137 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 CDH16O75309 829 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 ULK1O75385 1050 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 ERAL1O75616 437 aaKnown RBP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 NEURL1O76050 574 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 SLU7O95391 586 aaKnown RBP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 GPR75O95800 540 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 NME2P22392 152 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 RFC3P40938 356 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 SOX3P41225 446 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 HK2P52789 917 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 RNF4P78317 190 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 BTKQ06187 659 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 UNC50Q53HI1 259 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 NDUFAF5Q5TEU4 345 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 OPN5Q6U736 354 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 C16orf47Q6ZP98 133 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 ST13P4Q8IZP2 240 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 C4orf33Q8N1A6 199 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 CPSF7Q8N684 471 aaKnown RBP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF321PQ8N8H1 164 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 EXPH5Q8NEV8 1989 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 MYRIPQ8NFW9 859 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 OR4K14Q8NGD5 310 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 ZNF382Q96SR6 550 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 TXLNGYQ9BZA5 131 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 BRINP2Q9C0B6 783 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 BRF2Q9HAW0 419 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 MID1IP1Q9NPA3 183 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 PSD3Q9NYI0 1048 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 ADAM29Q9UKF5 820 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 PSME2Q9UL46 239 aa10.71□□□□□ -0.69
CPNE1-222ENST00000473373 V9GYY5 206 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-222ENST00000473373 DNAJC13O75165 2243 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 A0A1W2PR48 441 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 FOXO6A8MYZ6 492 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 MANBAO00462 879 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 CCL21O00585 134 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 PPP6CO00743 305 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 PEX1O43933 1283 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 P04436 131 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ENO1P06733 434 aaKnown RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 SBK3P0C264 359 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 KRT4P19013 534 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 MST1P26927 711 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 TDGF1P3P51864 188 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 PRKAA2P54646 552 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 PKNOX1P55347 436 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ACSM2AQ08AH3 577 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ASPHQ12797 758 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 CSTF3Q12996 717 aaKnown RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 LCP2Q13094 533 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 KRTCAP3Q53RY4 240 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 TCHHL1Q5QJ38 904 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ACSM2BQ68CK6 577 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ZYG11AQ6WRX3 759 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 FAM47EQ6ZV65 393 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 COMMD6Q7Z4G1 85 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 GPALPP1Q8IXQ4 340 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms