RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ASPHQ12797 758 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 HYAL4Q2M3T9 481 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 EMC4Q5J8M3 183 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 UBAP2Q5T6F2 1119 aaKnown RBP14.14□□□□□ -0.15
VTI1A-203ENST00000472892 TMEM211Q6ICI0 200 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 GK5Q6ZS86 529 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 CEP128Q6ZU80 1094 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 SLC22A16Q86VW1 577 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 C9orf40Q8IXQ3 194 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 ST13P4Q8IZP2 240 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-203ENST00000472892 PLD6Q8N2A8 252 aaKnown RBP14.14□□□□□ -0.15
VTI1A-203ENST00000472892 CA5BP1Q8WTZ4 195 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 ISL2Q96A47 359 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 SDCCAG3Q96C92 435 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 FBXL20Q96IG2 436 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 SPOCK3Q9BQ16 436 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 VPS11Q9H270 941 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 TP63Q9H3D4 680 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-203ENST00000472892 IL1RL2Q9HB29 575 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 SACM1LQ9NTJ5 587 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 COQ3Q9NZJ6 369 aa14.14□□□□□ -0.15
VTI1A-203ENST00000472892 A0A1W2PR48 441 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 WASHC1A8K0Z3 465 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 FAM166BA8MTA8 275 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 G3V3Y1 287 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 ACOT7O00154 380 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 OR7A17O14581 309 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 TMPRSS11DO60235 418 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 PRKRAO75569 313 aaKnown RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 CLDN9O95484 217 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 IGHG3P01860 377 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 GALNSP34059 522 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 BUD31P41223 144 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 WHAMMP3Q1A5X7 153 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 ZNF791Q3KP31 576 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 TECRLQ5HYJ1 363 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 LYPD8Q6UX82 237 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 MMGT1Q8N4V1 131 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 SLC15A4Q8N697 577 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 SLC44A1Q8WWI5 657 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 ART5Q96L15 291 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 PELOQ9BRX2 385 aaKnown RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 ENKD1Q9H0I2 346 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 TSPYL1Q9H0U9 437 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 NOL11Q9H8H0 719 aaKnown RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 SH2D2AQ9NP31 389 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 ZNF358Q9NW07 568 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 LYARQ9NX58 379 aaKnown RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 CPSF2Q9P2I0 782 aaKnown RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 MTRF1LQ9UGC7 380 aaKnown RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 DMGDHQ9UI17 866 aaKnown RBP14.13□□□□□ -0.15
VTI1A-203ENST00000472892 PDZD2O15018 2839 aa14.13□□□□□ -0.15
VTI1A-203ENST00000472892 PKDREJQ9NTG1 2253 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 A0A1B0GVC2 190 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 OR14I1A6ND48 311 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 STX16-NPEPL1H3BU86 382 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 STX16O14662 325 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 URI1O94763 535 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-203ENST00000472892 NADKO95544 446 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-203ENST00000472892 P04436 131 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 RBP1P09455 135 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 FAM58BPP0C7Q3 252 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 CCL3P10147 92 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 ELAVL4P26378 380 aaKnown RBP14.12□□□□□ -0.15
VTI1A-203ENST00000472892 SPRED3Q2MJR0 410 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 GXYLT1Q4G148 440 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 SLC22A10Q63ZE4 541 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 CYP20A1Q6UW02 462 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 FAM47EQ6ZV65 393 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 FAM109AQ8N4B1 249 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 TMEM251Q8N6I4 163 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 PTGR2Q8N8N7 351 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-203ENST00000472892 SLC22A8Q8TCC7 542 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 LURAP1Q96LR2 239 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 TREX2Q9BQ50 279 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-203ENST00000472892 NTMT1Q9BV86 223 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 CDC42EP4Q9H3Q1 356 aaKnown RBP14.12□□□□□ -0.15
VTI1A-203ENST00000472892 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.12□□□□□ -0.15
VTI1A-203ENST00000472892 TMCO1Q9UM00 188 aa14.12□□□□□ -0.15
VTI1A-203ENST00000472892 CSMD2Q7Z408 3487 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 IQANK1A0A1B0GTG1 560 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 GLOD5A6NK44 160 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 NPIPA2E9PIF3 369 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 NPIPA3F8WFD2 350 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 SEMA3DO95025 777 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 ACSL3O95573 720 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 INHBAP08476 426 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 SLC35E2P0CK97 266 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 NR2F6P10588 404 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 COL6A2P12110 1019 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 MAGEA5P43359 124 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 DNASE1L1P49184 302 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 SERPINB9P50453 376 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 SLC37A1P57057 533 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 TBL3Q12788 808 aaKnown RBP14.11□□□□□ -0.15
VTI1A-203ENST00000472892 ZNF267Q14586 743 aaPredicted RBP14.11□□□□□ -0.15
VTI1A-203ENST00000472892 SLC10A1Q14973 349 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 ADGRD1Q6QNK2 874 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 DCHS2Q6V1P9 2916 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 TRILQ7L0X0 811 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms