RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TSACCQ96A04 125 aaPredicted RBP2.42□□□□□ -2.02
XRN1-210ENST00000472697 PHF21AQ96BD5 680 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 DHX58Q96C10 678 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 PCED1BQ96HM7 432 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 TECTBQ96PL2 329 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 NPY6RQ99463 290 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 CBWD1Q9BRT8 395 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 AZI2Q9H6S1 392 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 NRBP2Q9NSY0 501 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 ZFP57Q9NU63 452 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 ZNF701Q9NV72 531 aaPredicted RBP2.42□□□□□ -2.02
XRN1-210ENST00000472697 C2orf42Q9NWW7 574 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 AHSPQ9NZD4 102 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 ZNF346Q9UL40 294 aaKnown RBP2.42□□□□□ -2.02
XRN1-210ENST00000472697 STUB1Q9UNE7 303 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 MRPS2Q9Y399 296 aaKnown RBP2.42□□□□□ -2.02
XRN1-210ENST00000472697 YIPF1Q9Y548 306 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 N6AMT1Q9Y5N5 214 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 ADGRB1O14514 1584 aa2.42□□□□□ -2.02
XRN1-210ENST00000472697 FER1L6Q2WGJ9 1857 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 C15orf38-AP3S2A0A0A6YYH1 394 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 C4orf47A7E2U8 309 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ZNF587BE7ETH6 402 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 NPIPA2E9PIF3 369 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 PRRG1O14668 218 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 TLX3O43711 291 aaPredicted RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 SNX3O60493 162 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 KIAA0754O94854 1291 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 SOX30O94993 753 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 F10P00742 488 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ALOX5P09917 674 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ADORA3P0DMS8 318 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 OR8G3PP0DMU2 310 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 HKR1P10072 659 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 CD59P13987 128 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 EPHA2P29317 976 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ATP5C1P36542 298 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 SLC9A3P48764 834 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 POU3F4P49335 361 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 TPMTP51580 245 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 EIF3EP60228 445 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 MTX1Q13505 466 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 EXOSC2Q13868 293 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 FAM153CQ494X1 144 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 LRRC37A5PQ49AS3 106 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ELFN2Q5R3F8 820 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 UGT3A1Q6NUS8 523 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 PNCKQ6P2M8 343 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 FJX1Q86VR8 437 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 FAM228AQ86W67 206 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 LRRC43Q8N309 656 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 PARP8Q8N3A8 854 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 NIPA2Q8N8Q9 360 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 PRR26Q8N8Z3 221 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 SIDT2Q8NBJ9 832 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 BHLHE22Q8NFJ8 381 aaPredicted RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 LARP4BQ92615 738 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 LPAR1Q92633 364 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 P3H4Q92791 437 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 SLC35C1Q96A29 364 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 RAB39BQ96DA2 213 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 C14orf79Q96F83 325 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 RPGRIP1Q96KN7 1286 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 PCDHB18PQ96TA0 734 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 BPIFA3Q9BQP9 254 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ALG12Q9BV10 488 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 GSDMCQ9BYG8 508 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ZDHHC6Q9H6R6 413 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 GPR173Q9NS66 373 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 AGPAT5Q9NUQ2 364 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 TBC1D13Q9NVG8 400 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 RALYQ9UKM9 306 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 PSME2Q9UL46 239 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 FZD10Q9ULW2 581 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 LAMB1P07942 1786 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 NRXN2Q9P2S2 1712 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 ANKRD36BQ8N2N9 1353 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 NEDD4P46934 1319 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 TRAV24A0A0B4J272 114 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 SMIM35A0A1B0GVV1 85 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 SHISA7A6NL88 538 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 OR52A4PA6NMU1 304 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 FAM25EA8MYX2 175 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 CA1P00915 261 aaPredicted RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 YES1P07947 543 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 SAGP10523 405 aaPredicted RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 HSD17B3P37058 310 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 NPY2RP49146 381 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 SLC11A1P49279 550 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 VAMP7P51809 220 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 MYBPC1Q00872 1141 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 NR1D2Q14995 579 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 INPP5JQ15735 1006 aaPredicted RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 LIPNQ5VXI9 398 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 DHDDSQ86SQ9 333 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 PATL1Q86TB9 770 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 YRDCQ86U90 279 aaKnown RBP2.41□□□□□ -2.02
XRN1-210ENST00000472697 SLC22A16Q86VW1 577 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 RNF130Q86XS8 419 aa2.41□□□□□ -2.02
XRN1-210ENST00000472697 LDLRAD3Q86YD5 345 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms