RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 NADSYN1Q6IA69 706 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 Q6ZRG5 221 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 Q71RC1 249 aaPredicted RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 ZCCHC7Q8N3Z6 543 aaKnown RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 NUDCD2Q8WVJ2 157 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 DYRK2Q92630 601 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 MRPL24Q96A35 216 aaKnown RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 FAM218AQ96MZ4 157 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 ACCSQ96QU6 501 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 KRT12Q99456 494 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 NKX3-1Q99801 234 aaPredicted RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 LRRCC1Q9C099 1032 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 C6orf106Q9H6K1 298 aaPredicted RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 ZFP57Q9NU63 452 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 COX16Q9P0S2 106 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 ZNF490Q9ULM2 529 aaPredicted RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 ZNF175Q9Y473 711 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 ANGPTL3Q9Y5C1 460 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 CUX2O14529 1486 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 FGD5Q6ZNL6 1462 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 MSGN1A6NI15 193 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 K7EQM0 130 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 SLC1A7O00341 560 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 CXCL11O14625 94 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 GPRIN2O60269 458 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 MFN2O95140 757 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 NADKO95544 446 aaPredicted RBP5.8□□□□□ -1.48
SMC5-202ENST00000471372 FGF19O95750 216 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 GOT2P00505 430 aaKnown RBP5.8□□□□□ -1.48
SMC5-202ENST00000471372 FHITP49789 147 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 XGP55808 180 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 CSNK2BP67870 215 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 NUCB2P80303 420 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 MRPS21P82921 87 aaKnown RBP5.8□□□□□ -1.48
SMC5-202ENST00000471372 NAAAQ02083 359 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 CNTN2Q02246 1040 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 IZUMO4Q1ZYL8 232 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 CCDC57Q2TAC2 916 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 LRIT3Q3SXY7 679 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 CCDC183Q5T5S1 534 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 NIPAL3Q6P499 406 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 C9orf139Q6ZV77 190 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 LHFPL4Q7Z7J7 247 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 STPG4Q8N801 248 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 NIPA2Q8N8Q9 360 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 MLKLQ8NB16 471 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 C8orf46Q8TAG6 207 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 LMO3Q8TAP4 145 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 GIPC3Q8TF64 312 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 TM9SF4Q92544 642 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 INPP4AQ96PE3 977 aaPredicted RBP5.8□□□□□ -1.48
SMC5-202ENST00000471372 RAB40CQ96S21 281 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 TESK2Q96S53 571 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 ZNF607Q96SK3 696 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 SLC25A19Q9HC21 320 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 FANCFQ9NPI8 374 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 RNF7Q9UBF6 113 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 ATP6V1HQ9UI12 483 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 KLF2Q9Y5W3 355 aaPredicted RBP5.8□□□□□ -1.48
SMC5-202ENST00000471372 SELENOKQ9Y6D0 94 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 PARD3Q8TEW0 1356 aa5.8□□□□□ -1.48
SMC5-202ENST00000471372 hCG_38984A0A1B0GV85 526 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 NKX6-3A6NJ46 265 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 LACTBL1A8MY62 500 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 TRMUO75648 421 aaKnown RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 ANXA9O76027 345 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 PAK4O96013 591 aaPredicted RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 VTNP04004 478 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 PAX1P15863 534 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 OTX2P32243 289 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 P2RY14Q15391 338 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 GTDC1Q4AE62 458 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 LRRC23Q53EV4 343 aaPredicted RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 SPATA46Q5T0L3 261 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 SLC39A4Q6P5W5 647 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 LRRC8BQ6P9F7 803 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 ZNF790Q6PG37 636 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 CBLN3Q6UW01 205 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 CWC27Q6UX04 472 aaKnown RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 ZNF771Q7L3S4 317 aaPredicted RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 GOLGA7Q7Z5G4 137 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 STEAP2Q8NFT2 490 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 GATAD1Q8WUU5 269 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 SUSD6Q92537 303 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 LRR1Q96L50 414 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 TCHPQ9BT92 498 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 WRAP53Q9BUR4 548 aaKnown RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 PAPOLGQ9BWT3 736 aaKnown RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 COG4Q9H9E3 785 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 B9D1Q9UPM9 204 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 SLC6A5Q9Y345 797 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 PCDHGB1Q9Y5G3 927 aa5.79□□□□□ -1.48
SMC5-202ENST00000471372 GREB1LQ9C091 1923 aaPredicted RBP5.79□□□□□ -1.48
SMC5-202ENST00000471372 TRIP12Q14669 1992 aaPredicted RBP5.78□□□□□ -1.48
SMC5-202ENST00000471372 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 AP3B1O00203 1094 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 KIAA0513O60268 411 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 CDC123O75794 336 aaPredicted RBP5.78□□□□□ -1.48
SMC5-202ENST00000471372 NDUFA7O95182 113 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 ANGPTL1O95841 491 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms