RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MYF5P13349 255 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 FASP25445 335 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 KDELR2P33947 212 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 MPIP34949 423 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 MPLP40238 635 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 CCT3P49368 545 aaKnown RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 ARL4DP49703 201 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 DSTNP60981 165 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 TXNL4AP83876 142 aaKnown RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 SHC2P98077 582 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 DUSP2Q05923 314 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ELOAQ14241 798 aaKnown RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 GRM7Q14831 915 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ATP6AP1Q15904 470 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 CLPPQ16740 277 aaPredicted RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 AMZ1Q400G9 498 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 LRRC23Q53EV4 343 aaPredicted RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 CMPK2Q5EBM0 449 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 PERM1Q5SV97 790 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 TMTC4Q5T4D3 741 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 INTS11Q5TA45 600 aaKnown RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 LPCAT4Q643R3 524 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 HMBOX1Q6NT76 420 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 GUSBP11Q6P575 273 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 BHLHB9Q6PI77 547 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ENPP6Q6UWR7 440 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 IZUMO2Q6UXV1 221 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 USP53Q70EK8 1073 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 C6orf120Q7Z4R8 191 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 LRRC25Q8N386 305 aaPredicted RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 D2HGDHQ8N465 521 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 FAM86B1Q8N7N1 296 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ANKFN1Q8N957 763 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 TTC29Q8NA56 475 aaPredicted RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 OR4K14Q8NGD5 310 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 OR5T3Q8NGG3 340 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 OR56A1Q8NGH5 318 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 OR9A4Q8NGU2 314 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 FBXO30Q8TB52 745 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 FAM110BQ8TC76 370 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 NETO1Q8TDF5 533 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 N4BP2L2Q92802 583 aaPredicted RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 TANKQ92844 425 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 TBC1D20Q96BZ9 403 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 SLC47A1Q96FL8 570 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 SLC35G5Q96KT7 338 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 SEPHS2Q99611 448 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ZNF184Q99676 751 aaPredicted RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 KLHL4Q9C0H6 718 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 A4GALTQ9NPC4 353 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ZCCHC3Q9NUD5 404 aaKnown RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 TMEM9Q9P0T7 183 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 RPS6KA6Q9UK32 745 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 MAP4K5Q9Y4K4 846 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 PCDHGA5Q9Y5G8 931 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ADAMTS9Q9P2N4 1935 aa8.84□□□□□ -1
VPS52-216ENST00000471309 CACNA1EQ15878 2313 aa8.83□□□□□ -1
VPS52-216ENST00000471309 COL5A1P20908 1838 aaPredicted RBP8.83□□□□□ -1
VPS52-216ENST00000471309 A0A0A6YYC8 382 aaPredicted RBP8.83□□□□□ -1
VPS52-216ENST00000471309 H0YIG0 161 aa8.83□□□□□ -1
VPS52-216ENST00000471309 H3BMH7 237 aa8.83□□□□□ -1
VPS52-216ENST00000471309 I3L1I5 382 aaPredicted RBP8.83□□□□□ -1
VPS52-216ENST00000471309 FOXS1O43638 330 aa8.83□□□□□ -1
VPS52-216ENST00000471309 DNAJB6O75190 326 aa8.83□□□□□ -1
VPS52-216ENST00000471309 OR2B3O76000 313 aa8.83□□□□□ -1
VPS52-216ENST00000471309 PRKD3O94806 890 aa8.83□□□□□ -1
VPS52-216ENST00000471309 MED26O95402 600 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CPNE6O95741 557 aa8.83□□□□□ -1
VPS52-216ENST00000471309 SEMG1P04279 462 aa8.83□□□□□ -1
VPS52-216ENST00000471309 ATP1B1P05026 303 aa8.83□□□□□ -1
VPS52-216ENST00000471309 ZNF883P0CG24 379 aa8.83□□□□□ -1
VPS52-216ENST00000471309 C8orf89P0DMQ9 161 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CKMT1AP12532 417 aa8.83□□□□□ -1
VPS52-216ENST00000471309 RNH1P13489 461 aaKnown RBP8.83□□□□□ -1
VPS52-216ENST00000471309 CPMP14384 443 aa8.83□□□□□ -1
VPS52-216ENST00000471309 ACADSP16219 412 aa8.83□□□□□ -1
VPS52-216ENST00000471309 NELFEP18615 380 aaKnown RBP8.83□□□□□ -1
VPS52-216ENST00000471309 PPP2R1BP30154 601 aa8.83□□□□□ -1
VPS52-216ENST00000471309 FEN1P39748 380 aaKnown RBP8.83□□□□□ -1
VPS52-216ENST00000471309 GCGRP47871 477 aa8.83□□□□□ -1
VPS52-216ENST00000471309 AVPR1BP47901 424 aa8.83□□□□□ -1
VPS52-216ENST00000471309 PRIM2P49643 509 aa8.83□□□□□ -1
VPS52-216ENST00000471309 KHKP50053 298 aa8.83□□□□□ -1
VPS52-216ENST00000471309 SIM1P81133 766 aaPredicted RBP8.83□□□□□ -1
VPS52-216ENST00000471309 PRR5P85299 388 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CDK6Q00534 326 aa8.83□□□□□ -1
VPS52-216ENST00000471309 EEF1A2Q05639 463 aaKnown RBP8.83□□□□□ -1
VPS52-216ENST00000471309 CHRNB3Q05901 458 aa8.83□□□□□ -1
VPS52-216ENST00000471309 TP53BP2Q13625 1128 aa8.83□□□□□ -1
VPS52-216ENST00000471309 SCARB2Q14108 478 aa8.83□□□□□ -1
VPS52-216ENST00000471309 C16orf72Q14CZ0 275 aa8.83□□□□□ -1
VPS52-216ENST00000471309 NKG7Q16617 165 aa8.83□□□□□ -1
VPS52-216ENST00000471309 ZNF750Q32MQ0 723 aa8.83□□□□□ -1
VPS52-216ENST00000471309 PROX2Q3B8N5 592 aa8.83□□□□□ -1
VPS52-216ENST00000471309 GRAMD1BQ3KR37 738 aa8.83□□□□□ -1
VPS52-216ENST00000471309 WLSQ5T9L3 541 aa8.83□□□□□ -1
VPS52-216ENST00000471309 YOD1Q5VVQ6 348 aaPredicted RBP8.83□□□□□ -1
VPS52-216ENST00000471309 TMEM71Q6P5X7 295 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CEACAM20Q6UY09 585 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CBLL1Q75N03 491 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms