RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ADAM10O14672 748 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 ASNA1O43681 348 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 MAN1A2O60476 641 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 PRAMEF4O60810 478 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 KRT6AP02538 564 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 KRT6BP04259 564 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SP1P08047 785 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 KITP10721 976 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 ABOP16442 354 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 IL10P22301 178 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 GRK3P35626 688 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 KRT6CP48668 564 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 FOXA1P55317 472 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 TAS2R50P59544 299 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 KRTAP10-9P60411 292 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 REEP5Q00765 189 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 RHAGQ02094 409 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 IFT88Q13099 833 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SLBPQ14493 270 aaKnown RBP eCLIP8.48□□□□□ -1.05
SF3A1-206ENST00000471037 KRTAP21-3Q3LHN1 58 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 UGT3A2Q3SY77 523 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SFT2D3Q587I9 215 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 CATSPEREQ5SY80 951 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 PRAMEF9Q5VWM5 478 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 CLEC6AQ6EIG7 209 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SLC25A25Q6KCM7 469 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 CGB2Q6NT52 195 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 MED27Q6P2C8 311 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 PAPD4Q6PIY7 484 aaKnown RBP8.48□□□□□ -1.05
SF3A1-206ENST00000471037 GALNTL5Q7Z4T8 443 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SPATA21Q7Z572 469 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 CDH24Q86UP0 819 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 PDSS2Q86YH6 399 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 EID3Q8N140 333 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 KRT78Q8N1N4 520 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 TBC1D19Q8N5T2 526 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 CAMKVQ8NCB2 501 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 OR4K1Q8NGD4 311 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 CHTF18Q8WVB6 975 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 TWIST2Q8WVJ9 160 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 OR1F2PQ96R84 312 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 LPAR4Q99677 370 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 FAM107BQ9H098 131 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 NT5DC2Q9H857 520 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 TRIM45Q9H8W5 580 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-206ENST00000471037 MCCC2Q9HCC0 563 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 ANKHQ9HCJ1 492 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 TNFRSF12AQ9NP84 129 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 NPHS2Q9NP85 383 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 LANCL2Q9NS86 450 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 PNPOQ9NVS9 261 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 ANKRD10Q9NXR5 420 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 ADGRE2Q9UHX3 823 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 NPIPA1Q9UND3 350 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SH2B3Q9UQQ2 575 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 TSC22D4Q9Y3Q8 395 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 DNAJC15Q9Y5T4 150 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SLC22A7Q9Y694 548 aa8.48□□□□□ -1.05
SF3A1-206ENST00000471037 SCN2AQ99250 2005 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 TACC2O95359 2948 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 TRBC2A0A5B9 178 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SERTM1A2A2V5 107 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 OR2W5A6NFC9 320 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 MAGEB17A8MXT2 336 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 TMEM233B4DJY2 109 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SGK494L7N484 410 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 NDUFAB1O14561 156 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 NME2P1O60361 137 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SNX3O60493 162 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ULK1O75385 1050 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 RDH16O75452 317 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SKAP2O75563 359 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SLC25A12O75746 678 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 STATHP02808 62 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 HSD3B1P14060 373 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ZNF24P17028 368 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 CD22P20273 847 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 NME2P22392 152 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 HSD3B2P26439 372 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 GSTM2P28161 218 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SERPINB1P30740 379 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SLC26A5P58743 744 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 CSNK1G2P78368 415 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 PHEXP78562 749 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 OC90Q02509 493 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 TLE4Q04727 773 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ABRAXAS2Q15018 415 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 NSDHLQ15738 373 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 PDCD2Q16342 344 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 CPSF6Q16630 551 aaKnown RBP eCLIP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 GKAP1Q5VSY0 366 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 FRG2Q64ET8 278 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 TMIGD1Q6UXZ0 262 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 NCCRP1Q6ZVX7 275 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 PIGWQ7Z7B1 504 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ASPGQ86U10 573 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 DOLPP1Q86YN1 238 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 LAS2Q8IYD9 372 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms