RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 GLIPR2Q9H4G4 154 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 SOX17Q9H6I2 414 aaPredicted RBP10.56□□□□□ -0.72
SREBF1-209ENST00000470247 WDR54Q9H977 334 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 MSRB2Q9Y3D2 182 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 NEUROG3Q9Y4Z2 214 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 WDFY3Q8IZQ1 3526 aa10.56□□□□□ -0.72
SREBF1-209ENST00000470247 LOC101059948A0A1B0GTJ6 334 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 DYTNA2CJ06 578 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CCDC154A6NI56 674 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 STMND1H3BQB6 276 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 RNASET2O00584 256 aaKnown RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CFLARO15519 480 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 ERAL1O75616 437 aaKnown RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CBX6O95503 412 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 UMODP07911 640 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CCNYL3P0C7X3 344 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 SLC35E2P0CK97 266 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CPMP14384 443 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 HOXB9P17482 250 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CSNK2A2P19784 350 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 TCN2P20062 427 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 PPP2R1BP30154 601 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 PTGER1P34995 402 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 KCNK10P57789 538 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 MGAT2Q10469 447 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CYLC2Q14093 348 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 MLC1Q15049 377 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 TGIF1Q15583 401 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 TIGD2Q4W5G0 525 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 SLC2A7Q6PXP3 512 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 DLEU7Q6UYE1 221 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 ZNF551Q7Z340 670 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 ANKRD46Q86W74 232 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CCDC116Q8IYX3 515 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 ENDOVQ8N8Q3 282 aaKnown RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 PSMA8Q8TAA3 256 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 GTF2H4Q92759 462 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 ZNF578Q96N58 590 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 PTCHD1Q96NR3 888 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CCDC115Q96NT0 180 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 AMDHD1Q96NU7 426 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 INPP5KQ9BT40 448 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 SLC25A23Q9BV35 468 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 ALOXE3Q9BYJ1 711 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 SLC6A13Q9NSD5 602 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 SIRT3Q9NTG7 399 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 ACSS1Q9NUB1 689 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 C14orf105Q9NVL8 296 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 FAM120CQ9NX05 1096 aaKnown RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 SLAMF8Q9P0V8 285 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 BTNL2Q9UIR0 455 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 CROTQ9UKG9 612 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 PSME2Q9UL46 239 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 MKL2Q9ULH7 1088 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 MRPS33Q9Y291 106 aaKnown RBP10.55□□□□□ -0.72
SREBF1-209ENST00000470247 MAN2B2Q9Y2E5 1009 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 NDUFAF1Q9Y375 327 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 AK5Q9Y6K8 562 aa10.55□□□□□ -0.72
SREBF1-209ENST00000470247 TCRBV16S1A1N1A0A5B0 115 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 IDSB3KWA1 339 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 C9J4A7 227 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 PDPK1O15530 556 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 ALOX12BO75342 701 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 C6orf47O95873 294 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 C1QCP02747 245 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 CYC1P08574 325 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 ADRB1P08588 477 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 PORP16435 677 aaPredicted RBP10.54□□□□□ -0.72
SREBF1-209ENST00000470247 CDKN2CP42773 168 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 EMP2P54851 167 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 HBA1P69905 142 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 BNIP1Q12981 228 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 SLC13A2Q13183 592 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 DNASE1L3Q13609 305 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 MAPRE2Q15555 327 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 SPRED3Q2MJR0 410 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 TBC1D25Q3MII6 688 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 MINDY4Q4G0A6 757 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 COQ5Q5HYK3 327 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 ANXA8L1Q5VT79 327 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 TMEM205Q6UW68 189 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 MSANTD1Q6ZTZ1 278 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 DPP10Q8N608 796 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 NATD1Q8N6N6 113 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 AMER2Q8N7J2 671 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 OR2Y1Q8NGV0 311 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 GOT1L1Q8NHS2 421 aaPredicted RBP10.54□□□□□ -0.72
SREBF1-209ENST00000470247 OR5P2Q8WZ92 322 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 PPWD1Q96BP3 646 aaKnown RBP10.54□□□□□ -0.72
SREBF1-209ENST00000470247 CTHRC1Q96CG8 243 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 NXPE2Q96DL1 559 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 NSL1Q96IY1 281 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 THSD1Q9NS62 852 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 ATAD3AQ9NVI7 634 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 GPN3Q9UHW5 284 aaPredicted RBP10.54□□□□□ -0.72
SREBF1-209ENST00000470247 TAGLN3Q9UI15 199 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 C3orf18Q9UK00 162 aa10.54□□□□□ -0.72
SREBF1-209ENST00000470247 NXT1Q9UKK6 140 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms