RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TEX13AQ9BXU3 409 aaPredicted RBP3.09□□□□□ -1.91
BRCA2-202ENST00000470094 TMEM245Q9H330 911 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 SP140LQ9H930 580 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 UBE2TQ9NPD8 197 aaPredicted RBP3.09□□□□□ -1.91
BRCA2-202ENST00000470094 DEPPQ9NTK1 212 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 MIS18AQ9NYP9 233 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ACTR3BQ9P1U1 418 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 TRIM10Q9UDY6 481 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 UBQLN2Q9UHD9 624 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 STRAPQ9Y3F4 350 aaKnown RBP3.09□□□□□ -1.91
BRCA2-202ENST00000470094 IGLV3-10A0A075B6K4 115 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 MAGEB16A2A368 324 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 CCDC162PA2VCL2 907 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 K7EQG2 157 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 TLR4O00206 839 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 PHF1O43189 567 aaPredicted RBP3.08□□□□□ -1.92
BRCA2-202ENST00000470094 TXNL1O43396 289 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 SH3BGRLO75368 114 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 PRDM1O75626 825 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 REC8O95072 547 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 FGF19O95750 216 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 MELTFP08582 738 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 CPA3P15088 417 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 DESP17661 470 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 UGT1A6P19224 532 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 CCNA2P20248 432 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 SFNP31947 248 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 SRP54P61011 504 aaKnown RBP3.08□□□□□ -1.92
BRCA2-202ENST00000470094 GALK2Q01415 458 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 SLC3A1Q07837 685 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 TSTA3Q13630 321 aaPredicted RBP3.08□□□□□ -1.92
BRCA2-202ENST00000470094 PDE7AQ13946 482 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 C3AR1Q16581 482 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 MUC21Q5SSG8 566 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 C12orf60Q5U649 245 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 MFSD7Q6UXD7 560 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 B3GLCTQ6Y288 498 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 LAX1Q8IWV1 398 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 KDM8Q8N371 416 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 FBXL16Q8N461 479 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 ZPLD1Q8TCW7 415 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 CD99L2Q8TCZ2 262 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 RFT1Q96AA3 541 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 NABP1Q96AH0 204 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 ALKBH3Q96Q83 286 aaPredicted RBP3.08□□□□□ -1.92
BRCA2-202ENST00000470094 TNFRSF13CQ96RJ3 184 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 FAM213AQ9BRX8 229 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 CARD9Q9H257 536 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 ZDHHC6Q9H6R6 413 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 PLEKHA3Q9HB20 300 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 KCNMB3Q9NPA1 279 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 ZCCHC3Q9NUD5 404 aaKnown RBP3.08□□□□□ -1.92
BRCA2-202ENST00000470094 TMED7Q9Y3B3 224 aa3.08□□□□□ -1.92
BRCA2-202ENST00000470094 DHX29Q7Z478 1369 aaKnown RBP3.08□□□□□ -1.92
BRCA2-202ENST00000470094 A0A1B0GTH9 108 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 SLC15A5A6NIM6 579 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 ANHXE9PGG2 379 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 HSF2BPO75031 334 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 CLN5O75503 358 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 STBD1O95210 358 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 MMP10P09238 476 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 AREGP15514 252 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 SLC1A4P43007 532 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 CAMLGP49069 296 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 GSK3BP49841 420 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 PRELPP51888 382 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 PEX3P56589 373 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 BACE1P56817 501 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 FKBP1BP68106 108 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 HTD2P86397 168 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 RBBP4Q09028 425 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 CEACAM7Q14002 265 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 PLPP4Q5VZY2 271 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 NEK5Q6P3R8 708 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 ZCCHC12Q6PEW1 402 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 REG3GQ6UW15 175 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 ELMOD2Q8IZ81 293 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 FGFRL1Q8N441 504 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 BANPQ8N9N5 519 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 RNF149Q8NC42 400 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 OR6F1Q8NGZ6 308 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 OR4Q3Q8NH05 313 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 LIPHQ8WWY8 451 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 SEPT8Q92599 483 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 GGHQ92820 318 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 SLC35C1Q96A29 364 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 TMEM186Q96B77 213 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 SLCO4A1Q96BD0 722 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 SAMD8Q96LT4 415 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 ANKRD27Q96NW4 1050 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 KCNK16Q96T55 309 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 CCM2Q9BSQ5 444 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 ABCG4Q9H172 646 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 PNNQ9H307 717 aaKnown RBP3.07□□□□□ -1.92
BRCA2-202ENST00000470094 VIPAS39Q9H9C1 493 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 NMUR1Q9HB89 426 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 TAS2R3Q9NYW6 316 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 THYN1Q9P016 225 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 CCPG1Q9ULG6 757 aa3.07□□□□□ -1.92
BRCA2-202ENST00000470094 SH3GLB1Q9Y371 365 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms