RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 FOLH1Q04609 750 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 TFF3Q07654 80 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 SETDB1Q15047 1291 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 ZNF791Q3KP31 576 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 SLC22A10Q63ZE4 541 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 CDH24Q86UP0 819 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 MYLK4Q86YV6 388 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 CCDC71Q8IV32 467 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 C9orf40Q8IXQ3 194 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 DND1Q8IYX4 353 aaKnown RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 ST13P4Q8IZP2 240 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 CENPLQ8N0S6 344 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 RNF175Q8N4F7 328 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 SLC15A4Q8N697 577 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 OR5M9Q8NGP3 310 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 KCTD4Q8WVF5 259 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 REPS1Q96D71 796 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 MTERF1Q99551 399 aaKnown RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 PELOQ9BRX2 385 aaKnown RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 UCK2Q9BZX2 261 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 ACTR8Q9H981 624 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 NPDC1Q9NQX5 325 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 TUBA8Q9NY65 449 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 LIPGQ9Y5X9 500 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 C2CD3Q4AC94 2353 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 H0YIV9 168 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 UGDHO60701 494 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 C2P06681 752 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 GFAPP14136 432 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 ALOX15P16050 662 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-208ENST00000470076 MSX1P28360 303 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 MAN2A2P49641 1150 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 ALDH18A1P54886 795 aaKnown RBP16.14■□□□□ 0.17
COL7A1-208ENST00000470076 HNRNPH2P55795 449 aaKnown RBP16.14■□□□□ 0.17
COL7A1-208ENST00000470076 GUCY2DQ02846 1103 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 SLC10A1Q14973 349 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 ACAP2Q15057 778 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 C18orf63Q68DL7 685 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 ZNF585AQ6P3V2 769 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 ZDHHC24Q6UX98 284 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 B3GNT6Q6ZMB0 384 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 PAQR8Q8TEZ7 354 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 PPWD1Q96BP3 646 aaKnown RBP16.14■□□□□ 0.17
COL7A1-208ENST00000470076 SARAFQ96BY9 339 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 SPACA9Q96E40 222 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-208ENST00000470076 LDAHQ9H6V9 325 aa16.14■□□□□ 0.17
COL7A1-208ENST00000470076 LYARQ9NX58 379 aaKnown RBP16.14■□□□□ 0.17
COL7A1-208ENST00000470076 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.14■□□□□ 0.17
COL7A1-208ENST00000470076 IQANK1A0A1B0GTG1 560 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 ATP6AP2A0A1C7CYW4 349 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 HRKO00198 91 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 PROM1O43490 865 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 KLK8O60259 260 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 HCN1O60741 890 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 WDR1O75083 606 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 ATP6AP2O75787 350 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 NADKO95544 446 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-208ENST00000470076 GPR75O95800 540 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 CASQ1P31415 396 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 PIK3CGP48736 1102 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 RPS13P62277 151 aaKnown RBP16.13■□□□□ 0.17
COL7A1-208ENST00000470076 IRF9Q00978 393 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 CUL3Q13618 768 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 PCBP2Q15366 365 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL7A1-208ENST00000470076 TRADDQ15628 312 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 PFKFB4Q16877 469 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 SPRED3Q2MJR0 410 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 MROH9Q5TGP6 573 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 DGAT2L6Q6ZPD8 337 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 SLC29A4Q7RTT9 530 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 DMRTC2Q8IXT2 367 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-208ENST00000470076 OR10Q1Q8NGQ4 319 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 TTYH2Q9BSA4 534 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 CNPPD1Q9BV87 410 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 SLC24A3Q9HC58 644 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 SH2D2AQ9NP31 389 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 SEMA4BQ9NPR2 832 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-208ENST00000470076 SNX15Q9NRS6 342 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 PSD3Q9NYI0 1048 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 CNIH4Q9P003 139 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 ACAD8Q9UKU7 415 aa16.13■□□□□ 0.17
COL7A1-208ENST00000470076 BOKQ9UMX3 212 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-208ENST00000470076 TNPO3Q9Y5L0 923 aaKnown RBP16.13■□□□□ 0.17
COL7A1-208ENST00000470076 NINQ8N4C6 2090 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 OR10H2O60403 315 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 HOXD4P09016 255 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-208ENST00000470076 CELA3AP09093 270 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 BSGP35613 385 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 PIGAP37287 484 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 HERVK_113P63132 956 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 ERVK-8P63133 956 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 KCNJ2P63252 427 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 WLSQ5T9L3 541 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 MRM1Q6IN84 353 aaKnown RBP16.12■□□□□ 0.17
COL7A1-208ENST00000470076 METTL2BQ6P1Q9 378 aaKnown RBP16.12■□□□□ 0.17
COL7A1-208ENST00000470076 KLC3Q6P597 504 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 ADGRD1Q6QNK2 874 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 CYP20A1Q6UW02 462 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 LYPD8Q6UX82 237 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 RNF111Q6ZNA4 994 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms