RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TNNI3P19429 210 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 SOX3P41225 446 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 CA7P43166 264 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 PRKAA2P54646 552 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 RBPJQ06330 500 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 RASA2Q15283 850 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 TEX35Q5T0J7 233 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 OR52E8Q6IFG1 317 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 Q6ZPB1 254 aaPredicted RBP13.04□□□□□ -0.32
COMMD3-208ENST00000470045 TDRPQ86YL5 185 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 SLC22A9Q8IVM8 553 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 SULF2Q8IWU5 870 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 CHERPQ8IWX8 916 aaKnown RBP13.04□□□□□ -0.32
COMMD3-208ENST00000470045 C9orf40Q8IXQ3 194 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 ZFP62Q8NB50 900 aaPredicted RBP13.04□□□□□ -0.32
COMMD3-208ENST00000470045 PSD4Q8NDX1 1056 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 OR5L2Q8NGL0 311 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 C16orf52Q8NHV5 167 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 NUBPLQ8TB37 319 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 TRPC4APQ8TEL6 797 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 L3HYPDHQ96EM0 354 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 ART5Q96L15 291 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 ZNF382Q96SR6 550 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 LIN28AQ9H9Z2 209 aaKnown RBP13.04□□□□□ -0.32
COMMD3-208ENST00000470045 PPCSQ9HAB8 311 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 WDR41Q9HAD4 459 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 COPS7AQ9UBW8 275 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 TBK1Q9UHD2 729 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 EMCNQ9ULC0 261 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 SNX6Q9UNH7 406 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
COMMD3-208ENST00000470045 MYO7BQ6PIF6 2116 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 GLOD5A6NK44 160 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 A8MVJ9 347 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 NPIPA5E9PKD4 350 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 KLRC4-KLRK1H3BQV0 150 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 HRKO00198 91 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 WWP2O00308 870 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 ASNA1O43681 348 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 PEX1O43933 1283 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 ZNF354AO60765 605 aaPredicted RBP13.03□□□□□ -0.32
COMMD3-208ENST00000470045 SLC19A2O60779 497 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 ZG16O60844 167 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 SUPT7LO94864 414 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 OR6B1O95007 311 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 PDYNP01213 254 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 HSD3B1P14060 373 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 IMPDH1P20839 514 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 HSD3B2P26439 372 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 MEOX1P50221 254 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 GALNT1Q10472 559 aaPredicted RBP13.03□□□□□ -0.32
COMMD3-208ENST00000470045 TBL3Q12788 808 aaKnown RBP13.03□□□□□ -0.32
COMMD3-208ENST00000470045 MPEG1Q2M385 716 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 FAM219BQ5XKK7 198 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 PAGE2Q7Z2X7 111 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 COMMD6Q7Z4G1 85 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 FJX1Q86VR8 437 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 SELENOMQ8WWX9 145 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 ASB15Q8WXK1 588 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 UCN3Q969E3 161 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 PPWD1Q96BP3 646 aaKnown RBP13.03□□□□□ -0.32
COMMD3-208ENST00000470045 RBM18Q96H35 190 aaKnown RBP13.03□□□□□ -0.32
COMMD3-208ENST00000470045 TSPAN10Q9H1Z9 355 aaPredicted RBP13.03□□□□□ -0.32
COMMD3-208ENST00000470045 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 TIMMDC1Q9NPL8 285 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 DEPPQ9NTK1 212 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
COMMD3-208ENST00000470045 HPF1Q9NWY4 346 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 AHSPQ9NZD4 102 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 DCDC2Q9UHG0 476 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 NPIPA1Q9UND3 350 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 EXPH5Q8NEV8 1989 aa13.03□□□□□ -0.32
COMMD3-208ENST00000470045 A0A1W2PPM1 405 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 A0A1W2PS29 197 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 PGRMC2O15173 223 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 DYRK3O43781 588 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 GLRA3O75311 464 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 CLPSP04118 112 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 KLK1P06870 262 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 SLC35E2P0CK97 266 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 CSTF3Q12996 717 aaKnown RBP13.02□□□□□ -0.33
COMMD3-208ENST00000470045 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 OPN5Q6U736 354 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 BNC2Q6ZN30 1099 aaPredicted RBP13.02□□□□□ -0.33
COMMD3-208ENST00000470045 GPRIN3Q6ZVF9 776 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 GHDCQ8N2G8 530 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 GOLM1Q8NBJ4 401 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.02□□□□□ -0.33
COMMD3-208ENST00000470045 SLC12A4Q9UP95 1085 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 STK38LQ9Y2H1 464 aa13.02□□□□□ -0.33
COMMD3-208ENST00000470045 TRGV8A0A0C4DH27 118 aa13.01□□□□□ -0.33
COMMD3-208ENST00000470045 FOXO6A8MYZ6 492 aa13.01□□□□□ -0.33
COMMD3-208ENST00000470045 G3V2L1 256 aa13.01□□□□□ -0.33
COMMD3-208ENST00000470045 MANBAO00462 879 aa13.01□□□□□ -0.33
COMMD3-208ENST00000470045 OR10H2O60403 315 aa13.01□□□□□ -0.33
COMMD3-208ENST00000470045 NADKO95544 446 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-208ENST00000470045 KRT6AP02538 564 aa13.01□□□□□ -0.33
COMMD3-208ENST00000470045 PROCP04070 461 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms