RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 OR12D1P0DN82 309 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 ALPPL2P10696 532 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 SOX9P48436 509 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 CCT3P49368 545 aaKnown RBP13.92□□□□□ -0.18
CBWD3-205ENST00000469687 COL9A2Q14055 689 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-205ENST00000469687 COLEC12Q5KU26 742 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 FAM46CQ5VWP2 391 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 DEF8Q6ZN54 512 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 C7orf61Q8IZ16 206 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 DEPDC4Q8N2C3 294 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 STX19Q8N4C7 294 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 OR2A1Q8NGT9 310 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 CREB3L4Q8TEY5 395 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 DPH7Q9BTV6 452 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 WDR12Q9GZL7 423 aaKnown RBP13.92□□□□□ -0.18
CBWD3-205ENST00000469687 SYNPO2LQ9H987 977 aa13.92□□□□□ -0.18
CBWD3-205ENST00000469687 ZAR1LA6NP61 321 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 CLK1P49759 484 aaKnown RBP13.91□□□□□ -0.18
CBWD3-205ENST00000469687 CRISP1P54107 249 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 TCEA2Q15560 299 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 ZNF750Q32MQ0 723 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 NDUFAF5Q5TEU4 345 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 OR4C11Q6IEV9 310 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 FRMPD2BQ6IN97 320 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 CACTIN-AS1Q8N1I8 211 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 FCGR1BQ92637 280 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 COL21A1Q96P44 957 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 PSD2Q9BQI7 771 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 SLC6A17Q9H1V8 727 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 GLIPR2Q9H4G4 154 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 KCNK12Q9HB15 430 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 FBXO8Q9NRD0 319 aa13.91□□□□□ -0.18
CBWD3-205ENST00000469687 A0A0A6YYD5 115 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 A0A1W2PS29 197 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 LRIT2A6NDA9 550 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 TMEM247A6NEH6 219 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SLC28A2O43868 658 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 TBX19O60806 448 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 HSMCR30P0CW71 290 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 ELAVL4P26378 380 aaKnown RBP13.9□□□□□ -0.18
CBWD3-205ENST00000469687 HSD17B2P37059 387 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 BCL6P41182 706 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SSR2P43308 183 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 PRDX1Q06830 199 aaKnown RBP13.9□□□□□ -0.18
CBWD3-205ENST00000469687 KIAA1161Q6NSJ0 714 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SLC46A3Q7Z3Q1 461 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SLC30A8Q8IWU4 369 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 RNF217Q8TC41 542 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 JPH3Q8WXH2 748 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-205ENST00000469687 ZBED6CLQ96FA7 236 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-205ENST00000469687 CAMK1GQ96NX5 476 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 OR5M11Q96RB7 305 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 IL4I1Q96RQ9 567 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 TREX2Q9BQ50 279 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-205ENST00000469687 KXD1Q9BQD3 176 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 YIPF4Q9BSR8 244 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 ROGDIQ9GZN7 287 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 PCBD2Q9H0N5 130 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 RSPH9Q9H1X1 276 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-205ENST00000469687 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 DDX31Q9H8H2 851 aaKnown RBP13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SFXN1Q9H9B4 322 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 FZD3Q9NPG1 666 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 DAPK2Q9UIK4 370 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 LOC100506127A0A0U1RQW1 187 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 M0R3H8 397 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 TRIM23P36406 574 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SERPINB10P48595 397 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SEC13P55735 322 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 CDC42P60953 191 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 DUSP2Q05923 314 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 GPR19Q15760 415 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 DUSP6Q16828 381 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 PTCHD4Q6ZW05 846 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 XAGE5Q8WWM1 108 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 OR51I1Q9H343 314 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 REV1Q9UBZ9 1251 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 MOSPD1Q9UJG1 213 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 ACSL5Q9ULC5 683 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 SCN2AQ99250 2005 aa13.9□□□□□ -0.18
CBWD3-205ENST00000469687 EN2P19622 333 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 GRK3P35626 688 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 KCNJ5P48544 419 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 RAB28P51157 221 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 BCAP31P51572 246 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 LSM11P83369 360 aaKnown RBP eCLIP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 HYAL2Q12891 473 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 PIN1Q13526 163 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 IRF3Q14653 427 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 KIAA1211LQ6NV74 962 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 FBXL6Q8N531 539 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 OR8K5Q8NH50 307 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 S100ZQ8WXG8 99 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 AMDHD1Q96NU7 426 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 QRFPRQ96P65 431 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 MAPKAP1Q9BPZ7 522 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 DSN1Q9H410 356 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms