RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 SEMA4BQ9NPR2 832 aaPredicted RBP13.67□□□□□ -0.22
SDCCAG3-209ENST00000468963 SNX15Q9NRS6 342 aa13.67□□□□□ -0.22
SDCCAG3-209ENST00000468963 SACM1LQ9NTJ5 587 aa13.67□□□□□ -0.22
SDCCAG3-209ENST00000468963 TUBA8Q9NY65 449 aaPredicted RBP13.67□□□□□ -0.22
SDCCAG3-209ENST00000468963 COPS7AQ9UBW8 275 aa13.67□□□□□ -0.22
SDCCAG3-209ENST00000468963 PHF11Q9UIL8 331 aa13.67□□□□□ -0.22
SDCCAG3-209ENST00000468963 HCFC1P51610 2035 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 A0A096LPK6 155 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 A0A0A6YYD5 115 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 A0A1W2PR48 441 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ESYT3A0FGR9 886 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 OR14I1A6ND48 311 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ACOT7O00154 380 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 UGDHO60701 494 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 EEDO75530 441 aaKnown RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 PRKRAO75569 313 aaKnown RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 TOXO94900 526 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 GPR75O95800 540 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ALDOAP04075 364 aaKnown RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 GFAPP14136 432 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 COX7A2P14406 83 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ALOX15P16050 662 aaPredicted RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 IGFBP2P18065 325 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 CHRNB4P30926 498 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 DNASE1L1P49184 302 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 RAP1GDS1P52306 607 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 NUP107P57740 925 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 TFF3Q07654 80 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 PMPCAQ10713 525 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 GTF2H2Q13888 395 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 GTF2H2CQ6P1K8 395 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 METTL2BQ6P1Q9 378 aaKnown RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 MEX3BQ6ZN04 569 aaKnown RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 GOLGA7Q7Z5G4 137 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 CCDC71Q8IV32 467 aaPredicted RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ST13P4Q8IZP2 240 aaPredicted RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 FAM109AQ8N4B1 249 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 SLC15A4Q8N697 577 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 RND1Q92730 232 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 UCN3Q969E3 161 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 MRRFQ96E11 262 aaKnown RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 FBXL20Q96IG2 436 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 CENPKQ9BS16 269 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 UCK2Q9BZX2 261 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 IPPKQ9H8X2 491 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ACTR8Q9H981 624 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 PROK2Q9HC23 129 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 PRM3Q9NNZ6 103 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 PNPLA3Q9NST1 481 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 RNF11Q9Y3C5 154 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ANGPTL3Q9Y5C1 460 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 ANKRD17O75179 2603 aaKnown RBP13.66□□□□□ -0.22
SDCCAG3-209ENST00000468963 FOXE1O00358 373 aaPredicted RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 AQP7O14520 342 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 TMPRSS11DO60235 418 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 SUSD5O60279 629 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 P04436 131 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 CELA3AP09093 270 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 CAPN3P20807 821 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 TYK2P29597 1187 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 GALNSP34059 522 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 PIGAP37287 484 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 MAGEA5P43359 124 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 NEK2P51955 445 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 SLC10A1Q14973 349 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 CPSF6Q16630 551 aaKnown RBP eCLIP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 UBAP2Q5T6F2 1119 aaKnown RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 SLC22A10Q63ZE4 541 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 ACAD11Q709F0 780 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 MYLK4Q86YV6 388 aaPredicted RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 PLD6Q8N2A8 252 aaKnown RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 PAQR8Q8TEZ7 354 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 FUT8Q9BYC5 575 aa13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 NPDC1Q9NQX5 325 aaPredicted RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 RYDENQ9NUL5 291 aaKnown RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 TNPO3Q9Y5L0 923 aaKnown RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.65□□□□□ -0.22
SDCCAG3-209ENST00000468963 OR7A17O14581 309 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 BCKDKO14874 412 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 PGRMC2O15173 223 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 DYRK3O43781 588 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 CLPSP04118 112 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 FAM58BPP0C7Q3 252 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 SLC37A1P57057 533 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 HERVK_113P63132 956 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 ERVK-8P63133 956 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 PLIN5Q00G26 463 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 TLE4Q04727 773 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 ZNF267Q14586 743 aaPredicted RBP13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 SPRED3Q2MJR0 410 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 TECRLQ5HYJ1 363 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 RTL6Q6ICC9 239 aa13.64□□□□□ -0.23
SDCCAG3-209ENST00000468963 RELL1Q8IUW5 271 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms