RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SMOC1Q9H4F8 434 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 POMKQ9H5K3 350 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 UNKLQ9H9P5 680 aaKnown RBP4.64□□□□□ -1.67
SF3B1-207ENST00000468925 SMURF2Q9HAU4 748 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 POPDC3Q9HBV1 291 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM138Q9NPI0 162 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 GPRC5CQ9NQ84 441 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 AIG1Q9NVV5 245 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 XPR1Q9UBH6 696 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 SEC14L3Q9UDX4 400 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 MUTYHQ9UIF7 546 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 DUSP13Q9UII6 198 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 TMEFF2Q9UIK5 374 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-207ENST00000468925 PKP3Q9Y446 797 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 GPR45Q9Y5Y3 372 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 BACE2Q9Y5Z0 518 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 PSAT1Q9Y617 370 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 OTOFQ9HC10 1997 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 FOCADQ5VW36 1801 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PRAMEF33A0A0G2JMD5 474 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 LOC285095A0A1B0GVY8 99 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CIB4A0PJX0 185 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM218A2RU14 115 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 NAP1L6A6NFF2 107 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 HMSDA8MTL9 139 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 H0YIN7 160 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 H7C0S8 307 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ACKR2O00590 384 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 UBE2CO00762 179 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PCDH17O14917 1159 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PLA2G10O15496 165 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PRODHO43272 600 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 LCMT2O60294 686 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PRAMEF10O60809 474 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SDC3O75056 442 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 EFCAB14O75071 495 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 USP2O75604 605 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GPX5O75715 221 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 METTL18O95568 372 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SERPINA5P05154 406 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ADRB2P07550 413 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CHRM5P08912 532 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CNPP09543 421 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SBK3P0C264 359 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PRR35P0CG20 571 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SLC35E2BP0CK96 405 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SULT1A3P0DMM9 295 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SULT1A4P0DMN0 295 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CYP19A1P11511 503 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CKBP12277 381 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CPN1P15169 458 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PPP3CBP16298 524 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GJA1P17302 382 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PAICSP22234 425 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ITGB8P26012 769 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 MGAT1P26572 445 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 FMO3P31513 532 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GGT2P36268 569 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ARL4AP40617 200 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 MNDAP41218 407 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 KIR3DL1P43629 444 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 LIG4P49917 911 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 P2RY4P51582 365 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 EPHA5P54756 1037 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 KIAA1024LP59773 190 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 IL2P60568 153 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PITPNAQ00169 270 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 EGR3Q06889 387 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 MLLT11Q13015 90 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CHAF1BQ13112 559 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 COTL1Q14019 142 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 MXD4Q14582 209 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 OPCMLQ14982 345 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SYT16Q17RD7 645 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 HFEQ30201 348 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF528Q3MIS6 628 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 TTLL9Q3SXZ7 439 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ARHGAP15Q53QZ3 475 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PAN3Q58A45 887 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF628Q5EBL2 1059 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 TECRLQ5HYJ1 363 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 STRIP1Q5VSL9 837 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SLC22A10Q63ZE4 541 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CPZQ66K79 652 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 DHRS7BQ6IAN0 325 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 FAHD1Q6P587 224 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 NOTUMQ6P988 496 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF549Q6P9A3 640 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 RNF165Q6ZSG1 346 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 MSANTD1Q6ZTZ1 278 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 TMPRSS11FQ6ZWK6 438 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 USP53Q70EK8 1073 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 AHSA2Q719I0 299 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SSX9Q7RTT3 188 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 FAM122BQ7Z309 247 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 TMPRSS9Q7Z410 1059 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CMC1Q7Z7K0 106 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GALNT5Q7Z7M9 940 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 COMTD1Q86VU5 262 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms