RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KHDRBS3O75525 346 aaKnown RBP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 TACSTD2P09758 323 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 RORCP51449 518 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 GRM7Q14831 915 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 KIR2DS5Q14953 304 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF77Q15935 545 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 CMPK2Q5EBM0 449 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 TCTE1Q5JU00 501 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 BICRALQ6AI39 1079 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 SERPINA11Q86U17 422 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 MAL2Q969L2 176 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 MYNNQ9NPC7 610 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 TRPV5Q9NQA5 729 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 SDHAF3Q9NRP4 125 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 SPATA6Q9NWH7 488 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 H3BNC9 293 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 SLC6A6P31641 620 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 TPRG1LQ5T0D9 272 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ADNP2Q6IQ32 1131 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 METTL27Q8N6F8 245 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 OR2L5Q8NG80 312 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 UBTD2Q8WUN7 234 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 PIK3R3Q92569 461 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 DAZLQ92904 295 aaKnown RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 PKMYT1Q99640 499 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 CLMPQ9H6B4 373 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 DNAJC27Q9NZQ0 273 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 DNAJB5O75953 348 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 PROS1P07225 676 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 MAGP20916 626 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ELK4P28324 431 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 CES4AQ5XG92 561 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 CPZQ66K79 652 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 GPR149Q86SP6 731 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 GALNT10Q86SR1 603 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ATCAYQ86WG3 371 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ZSWIM9Q86XI8 627 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 RBM12BQ8IXT5 1001 aaKnown RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 OR56A3Q8NH54 315 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 EGLN2Q96KS0 407 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 CLEC4MQ9H2X3 399 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 FAM118AQ9NWS6 357 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 THAP10Q9P2Z0 257 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 POLR2AP24928 1970 aaKnown RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 H0YIV9 168 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 OXSR1O95747 527 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 GP1BBP13224 206 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 TUBA1BP68363 451 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 PRDX1Q06830 199 aaKnown RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 OR4N5Q8IXE1 308 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 GTF2H4Q92759 462 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 TMEM80Q96HE8 168 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 FEVQ99581 238 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 C5AR2Q9P296 337 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ENPP4Q9Y6X5 453 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 CNTRLQ7Z7A1 2325 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 A0A0G2JPF8 293 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 HNRNPCL3B7ZW38 293 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 SNPHO15079 494 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ACOX3O15254 700 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 LAMTOR5O43504 91 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 XPNPEP2O43895 674 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 DHFRP00374 187 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 CSTAP01040 98 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 HNRNPCL4P0DMR1 293 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 MYOGP15173 224 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 RHAGQ02094 409 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 OC90Q02509 493 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-203ENST00000467558 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 SLC36A4Q6YBV0 504 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ADGRG5Q8IZF4 528 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 TMEM156Q8N614 296 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 OR8J1Q8NGP2 316 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 PIGKQ92643 395 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 WBP2Q969T9 261 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 ASB16Q96NS5 453 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 HDAC8Q9BY41 377 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 KLRF1Q9NZS2 232 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 CLEC4AQ9UMR7 237 aa13.14□□□□□ -0.31
BRAT1-203ENST00000467558 MCM3APO60318 1980 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 GABRR3A8MPY1 467 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 AHSA1O95433 338 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 ENDOUP21128 410 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 AZGP1P25311 298 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 PGM2L1Q6PCE3 622 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 HTRA1Q92743 480 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 C12orf43Q96C57 262 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 GPR78Q96P69 363 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms