RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 NUBPLQ8TB37 319 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 SLC2A12Q8TD20 617 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 PTPMT1Q8WUK0 201 aaPredicted RBP11.32□□□□□ -0.6
UBR4-210ENST00000466969 GORASP1Q9BQQ3 440 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 SOX7Q9BT81 388 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 OR10A4Q9H209 315 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 HEY2Q9UBP5 337 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 SYCE3A1L190 88 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 URADA6NGE7 173 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 SYF2O95926 243 aaKnown RBP11.31□□□□□ -0.6
UBR4-210ENST00000466969 ALDOAP04075 364 aaKnown RBP11.31□□□□□ -0.6
UBR4-210ENST00000466969 FBXO45P0C2W1 286 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 STARP49675 285 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 CDH11P55287 796 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 C21orf58P58505 322 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 RAB8AP61006 207 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 POU6F1Q14863 301 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 ODF2Q5BJF6 829 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 FNDC7Q5VTL7 733 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 SHQ1Q6PI26 577 aaKnown RBP11.31□□□□□ -0.6
UBR4-210ENST00000466969 CLNKQ7Z7G1 428 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 LINC01356Q8N9X3 169 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 OR14L1PQ8NHC6 308 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 UTP15Q8TED0 518 aaKnown RBP11.31□□□□□ -0.6
UBR4-210ENST00000466969 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 MMP27Q9H306 513 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 HAUS4Q9H6D7 363 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 MRPS33Q9Y291 106 aaKnown RBP11.31□□□□□ -0.6
UBR4-210ENST00000466969 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 CLDN16Q9Y5I7 305 aa11.31□□□□□ -0.6
UBR4-210ENST00000466969 TENM3Q9P273 2699 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 C17orf105B2RV13 164 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 PRMT5O14744 637 aaPredicted RBP11.3□□□□□ -0.6
UBR4-210ENST00000466969 GNB5O14775 395 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 HNF4AP41235 474 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 NTRK2Q16620 822 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 BICRALQ6AI39 1079 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 AAGABQ6PD74 315 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 ZNF571Q7Z3V5 609 aaPredicted RBP11.3□□□□□ -0.6
UBR4-210ENST00000466969 SVOPLQ8N434 492 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 OR1J4Q8NGS1 313 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 FBF1Q8TES7 1133 aa11.3□□□□□ -0.6
UBR4-210ENST00000466969 ALKBH8Q96BT7 664 aaKnown RBP11.3□□□□□ -0.6
UBR4-210ENST00000466969 CCDC177Q9NQR7 707 aaPredicted RBP11.3□□□□□ -0.6
UBR4-210ENST00000466969 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
UBR4-210ENST00000466969 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 H7C417 338 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 OR1F1O43749 312 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 PSIP1O75475 530 aaKnown RBP11.29□□□□□ -0.6
UBR4-210ENST00000466969 PROSCO94903 275 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 GOT2P00505 430 aaKnown RBP11.29□□□□□ -0.6
UBR4-210ENST00000466969 PSMB4P28070 264 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 BSPH1Q075Z2 132 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 STX4Q12846 297 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 SPARCL1Q14515 664 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 RPS6KA1Q15418 735 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 CARTPTQ16568 116 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 FASTKD1Q53R41 847 aaKnown RBP11.29□□□□□ -0.6
UBR4-210ENST00000466969 TIGD3Q6B0B8 471 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 C11orf71Q6IPW1 123 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 AFTPHQ6ULP2 937 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 IFNEQ86WN2 208 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 C17orf64Q86WR6 236 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 ZNF595Q8IYB9 648 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 RCOR2Q8IZ40 523 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 TMEM41AQ96HV5 264 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 SUCNR1Q9BXA5 334 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 ALOXE3Q9BYJ1 711 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 SLITRK2Q9H156 845 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 TEX10Q9NXF1 929 aaPredicted RBP11.29□□□□□ -0.6
UBR4-210ENST00000466969 MOCS1Q9NZB8 636 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 VTI1BQ9UEU0 232 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 DMGDHQ9UI17 866 aaKnown RBP11.29□□□□□ -0.6
UBR4-210ENST00000466969 ANAPC5Q9UJX4 755 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 USP22Q9UPT9 525 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 ZDHHC9Q9Y397 364 aa11.29□□□□□ -0.6
UBR4-210ENST00000466969 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.29□□□□□ -0.62e-9■□□□□ 9.6
UBR4-210ENST00000466969 MYOCOSA0A1B0GUC4 107 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 CAPN14A8MX76 684 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 LY6HO94772 140 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 BMP4P12644 408 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 TTKP33981 857 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
UBR4-210ENST00000466969 LHX2P50458 406 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 RPP38P78345 283 aaKnown RBP11.28□□□□□ -0.6
UBR4-210ENST00000466969 ZNF844Q08AG5 666 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 DOC2AQ14183 400 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 DOC2BQ14184 412 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 RPS6KA2Q15349 733 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 FAM214BQ7L5A3 538 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 LRRC56Q8IYG6 542 aaPredicted RBP11.28□□□□□ -0.6
UBR4-210ENST00000466969 FBXL14Q8N1E6 418 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 TBC1D19Q8N5T2 526 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 ZNF540Q8NDQ6 660 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms