RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 RBM18Q96H35 190 aaKnown RBP17.32■□□□□ 0.36
SRSF4-202ENST00000466448 FBXL20Q96IG2 436 aa17.32■□□□□ 0.36
SRSF4-202ENST00000466448 UBXN10Q96LJ8 280 aa17.32■□□□□ 0.36
SRSF4-202ENST00000466448 RPF2Q9H7B2 306 aaKnown RBP17.32■□□□□ 0.36
SRSF4-202ENST00000466448 PRM3Q9NNZ6 103 aa17.32■□□□□ 0.36
SRSF4-202ENST00000466448 ACKR4Q9NPB9 350 aa17.32■□□□□ 0.36
SRSF4-202ENST00000466448 RNF112Q9ULX5 631 aa17.32■□□□□ 0.36
SRSF4-202ENST00000466448 HSPB2A8KAH6 182 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 SYT5O00445 386 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 DYRK3O43781 588 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 LRATO95237 230 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 S100BP04271 92 aaPredicted RBP17.31■□□□□ 0.36
SRSF4-202ENST00000466448 FBXO45P0C2W1 286 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 STMN1P16949 149 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 TRPC1P48995 793 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 PPP2R2AP63151 447 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 TBL3Q12788 808 aaKnown RBP17.31■□□□□ 0.36
SRSF4-202ENST00000466448 SLAMF1Q13291 335 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 ZKSCAN8Q15776 578 aaPredicted RBP17.31■□□□□ 0.36
SRSF4-202ENST00000466448 HSPB2Q16082 182 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 C18orf63Q68DL7 685 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 MED27Q6P2C8 311 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 LRRC70Q7Z2Q7 622 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 RNF175Q8N4F7 328 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 OR7G3Q8NG95 312 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 NEIL3Q8TAT5 605 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 UBE2E3Q969T4 207 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 CMTM7Q96FZ5 175 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 ART5Q96L15 291 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 JSRP1Q96MG2 331 aaPredicted RBP17.31■□□□□ 0.36
SRSF4-202ENST00000466448 GAL3ST4Q96RP7 486 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 GPR22Q99680 433 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 RBBP8Q99708 897 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 SH3GL2Q99962 352 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 OR51B5Q9H339 312 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 CNIH4Q9P003 139 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 PLEKHA6Q9Y2H5 1048 aa17.31■□□□□ 0.36
SRSF4-202ENST00000466448 HRNRQ86YZ3 2850 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-202ENST00000466448 A6NNC1 897 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 KDM4EB2RXH2 506 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-202ENST00000466448 PROM1O43490 865 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
SRSF4-202ENST00000466448 ALOX15P16050 662 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-202ENST00000466448 BMP5P22003 454 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 SERPINB1P30740 379 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 SSTR1P30872 391 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 GMPRP36959 345 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 PEX19P40855 299 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 RPL21P46778 160 aaKnown RBP17.3■□□□□ 0.36
SRSF4-202ENST00000466448 WNT3P56703 355 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 TNFRSF17Q02223 184 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 CBLBQ13191 982 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 OR4C11Q6IEV9 310 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 GPR180Q86V85 440 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 CDC20BQ86Y33 519 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 CREG2Q8IUH2 290 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 DND1Q8IYX4 353 aaKnown RBP17.3■□□□□ 0.36
SRSF4-202ENST00000466448 LIX1Q8N485 282 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 TNIP2Q8NFZ5 429 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 TANKQ92844 425 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 WWTR1Q9GZV5 400 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.3■□□□□ 0.363e-6■■■□□ 15
SRSF4-202ENST00000466448 MS4A12Q9NXJ0 267 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 QPCTLQ9NXS2 382 aa17.3■□□□□ 0.36
SRSF4-202ENST00000466448 CNOT11Q9UKZ1 510 aaKnown RBP17.3■□□□□ 0.36
SRSF4-202ENST00000466448 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 DVL2O14641 736 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ZSCAN12O43309 604 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 SERPINB3P29508 390 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ASCL1P50553 236 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 SLC37A1P57057 533 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 HERVK_113P63132 956 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ERVK-8P63133 956 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 FOXD4Q12950 439 aaPredicted RBP17.29■□□□□ 0.36
SRSF4-202ENST00000466448 BIKQ13323 160 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 DDX39BQ13838 428 aaKnown RBP17.29■□□□□ 0.36
SRSF4-202ENST00000466448 EBPQ15125 230 aaKnown RBP17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ACSF3Q4G176 576 aaPredicted RBP17.29■□□□□ 0.36
SRSF4-202ENST00000466448 FLYWCH1Q4VC44 716 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 DEPDC1Q5TB30 811 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 SLC29A4Q7RTT9 530 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ST13P4Q8IZP2 240 aaPredicted RBP17.29■□□□□ 0.36
SRSF4-202ENST00000466448 DOHHQ9BU89 302 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ERVK-6Q9BXR3 956 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ALG9Q9H6U8 611 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 TXNDC16Q9P2K2 825 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 CBLCQ9ULV8 474 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ERVK-19Q9WJR5 959 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 SNX24Q9Y343 169 aa17.29■□□□□ 0.36
SRSF4-202ENST00000466448 ANKHD1Q8IWZ3 2542 aaKnown RBP17.28■□□□□ 0.36
SRSF4-202ENST00000466448 DNAJC13O75165 2243 aa17.28■□□□□ 0.36
SRSF4-202ENST00000466448 C15orf38-AP3S2A0A0A6YYH1 394 aa17.28■□□□□ 0.36
SRSF4-202ENST00000466448 IQANK1A0A1B0GTG1 560 aa17.28■□□□□ 0.36
SRSF4-202ENST00000466448 WASHC1A8K0Z3 465 aa17.28■□□□□ 0.36
SRSF4-202ENST00000466448 PLPP1O14494 284 aa17.28■□□□□ 0.36
SRSF4-202ENST00000466448 TRIM3O75382 744 aaPredicted RBP17.28■□□□□ 0.36
SRSF4-202ENST00000466448 DNASE1P24855 282 aa17.28■□□□□ 0.36
SRSF4-202ENST00000466448 GDF1P27539 372 aa17.28■□□□□ 0.36
SRSF4-202ENST00000466448 CEACAM8P31997 349 aaPredicted RBP17.28■□□□□ 0.36
SRSF4-202ENST00000466448 RAP1GDS1P52306 607 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms