RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SOX18P35713 384 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 KIR3DL1P43629 444 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 DGKQP52824 942 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 RPS18P62269 152 aaKnown RBP10.45□□□□□ -0.74
VCP-204ENST00000466100 SRSF11Q05519 484 aaKnown RBP10.45□□□□□ -0.74
VCP-204ENST00000466100 ACTN3Q08043 901 aaPredicted RBP10.45□□□□□ -0.74
VCP-204ENST00000466100 CLN3Q13286 438 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 DNASE1L3Q13609 305 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 ZNF750Q32MQ0 723 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 MINDY4Q4G0A6 757 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 CPTPQ5TA50 214 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 OR4F3Q6IEY1 312 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 FAM180BQ6P0A1 224 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 TMEM205Q6UW68 189 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 SHISA6Q6ZSJ9 500 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 OR4N5Q8IXE1 308 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 OR4K14Q8NGD5 310 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 SNIP1Q8TAD8 396 aaKnown RBP10.45□□□□□ -0.74
VCP-204ENST00000466100 CIDECQ96AQ7 238 aaPredicted RBP10.45□□□□□ -0.74
VCP-204ENST00000466100 ERP27Q96DN0 273 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 LRRC37BQ96QE4 947 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 ZBTB18Q99592 522 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 DUSP26Q9BV47 211 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 GPR87Q9BY21 358 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 SERHLQ9NQF3 203 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 TCFL5Q9UL49 500 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 MKL2Q9ULH7 1088 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 PTRH2Q9Y3E5 179 aaKnown RBP10.45□□□□□ -0.74
VCP-204ENST00000466100 MED13Q9UHV7 2174 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 ACACBO00763 2458 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 PTPRQQ9UMZ3 2332 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 A0A1W2PQ72 361 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 NR5A2O00482 541 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 PDPK1O15530 556 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 ALOX12BO75342 701 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 ERAL1O75616 437 aaKnown RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 IL6P05231 212 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 CD63P08962 238 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 C8orf89P0DMQ9 161 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 CPMP14384 443 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 PTPN4P29074 926 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 S100A3P33764 101 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 DLSTP36957 453 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 XKP51811 444 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 SLC13A2Q13183 592 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 TLR1Q15399 786 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 TERF2Q15554 542 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 TIGD2Q4W5G0 525 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 DGAT2L6Q6ZPD8 337 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 MSANTD1Q6ZTZ1 278 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 LANCL3Q6ZV70 420 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 TSPEARQ8WU66 669 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 VPS33AQ96AX1 596 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 SPDL1Q96EA4 605 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 PTCHD1Q96NR3 888 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 AMDHD1Q96NU7 426 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 PRPF18Q99633 342 aaKnown RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 MESP1Q9BRJ9 268 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 CRB3Q9BUF7 120 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 TRIM4Q9C037 500 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 GLIPR2Q9H4G4 154 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 ACSS1Q9NUB1 689 aaPredicted RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 ATAD3AQ9NVI7 634 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 FAM120CQ9NX05 1096 aaKnown RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 SH3BP4Q9P0V3 963 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 IL17BQ9UHF5 180 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 C3orf18Q9UK00 162 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 PSME2Q9UL46 239 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 ERVK-11Q9UQG0 969 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 FARSAQ9Y285 508 aaKnown RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 PADI2Q9Y2J8 665 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 HS3ST3B1Q9Y662 390 aa10.44□□□□□ -0.74
VCP-204ENST00000466100 MRPS18BQ9Y676 258 aaKnown RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 URB1O60287 2271 aaKnown RBP10.44□□□□□ -0.74
VCP-204ENST00000466100 NBEAQ8NFP9 2946 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 LOC102723996A0A087X1L8 192 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 MYOCOSA0A1B0GUC4 107 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 MED19A0JLT2 244 aaPredicted RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 DYTNA2CJ06 578 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 SYNDIG1LA6NDD5 238 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 RNASET2O00584 256 aaKnown RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 FBP2O00757 339 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 ATP1B1P05026 303 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 HEXBP07686 556 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 SNRPB2P08579 225 aaKnown RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 SLC35E2P0CK97 266 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 LIFP15018 202 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 PORP16435 677 aaPredicted RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 HOXB9P17482 250 aaPredicted RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 DDX5P17844 614 aaKnown RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 CSNK2A2P19784 350 aaPredicted RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 EFNA1P20827 205 aaPredicted RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 PTPN6P29350 595 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 GALNSP34059 522 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 FEN1P39748 380 aaKnown RBP10.43□□□□□ -0.74
VCP-204ENST00000466100 FOLR3P41439 243 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 STT3AP46977 705 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 EMP2P54851 167 aa10.43□□□□□ -0.74
VCP-204ENST00000466100 KCNK10P57789 538 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms