RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZNF410Q86VK4 478 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 SNX32Q86XE0 403 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 CARNMT1Q8N4J0 409 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 ZNF781Q8N8C0 355 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 TOMM40LQ969M1 308 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 MRPL24Q96A35 216 aaKnown RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 ESAMQ96AP7 390 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 CCDC28BQ9BUN5 200 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 LRRCC1Q9C099 1032 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 PRMT8Q9NR22 394 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 GDF3Q9NR23 364 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 DDX28Q9NUL7 540 aaKnown RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 TECRQ9NZ01 308 aaKnown RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 MRTO4Q9UKD2 239 aaKnown RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 MGAT4AQ9UM21 535 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 DDX39AO00148 427 aaKnown RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 CHEK1O14757 476 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 GALR3O60755 368 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 ANXA9O76027 345 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 TXNDC12O95881 172 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 TPBGLP0DKB5 382 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 B4GALT1P15291 398 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 ZNF18P17022 549 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 HLA-DPA1P20036 260 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 SPRP35270 261 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 RPL27P61353 136 aaKnown RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 WSCD2Q2TBF2 565 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 TCTEX1D4Q5JR98 221 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 SLC25A42Q86VD7 318 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 ERC1Q8IUD2 1116 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 LRRC49Q8IUZ0 686 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 WDR49Q8IV35 697 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 SERPINA12Q8IW75 414 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 CNTN4Q8IWV2 1026 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 SFRP1Q8N474 314 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 ZNF713Q8N859 430 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 ICA1LQ8NDH6 482 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 OR4L1Q8NH43 312 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 SNX21Q969T3 373 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 SLCO4A1Q96BD0 722 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 RUNDC3BQ96NL0 473 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 FOXN4Q96NZ1 517 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 NAP1L3Q99457 506 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 HSD17B14Q9BPX1 270 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 RSPH9Q9H1X1 276 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 SLC26A1Q9H2B4 701 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 NT5DC2Q9H857 520 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 FAM212BQ9NTI7 297 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-211ENST00000466054 CYP39A1Q9NYL5 469 aa3.4□□□□□ -1.87
LRCH3-211ENST00000466054 TRBV2A0A0J9YWF9 115 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 YJEFN3A6XGL0 299 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 RNF212BA8MTL3 300 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 SHISA9B4DS77 424 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 TSPAN2O60636 221 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 GMNNO75496 209 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 OLFM2O95897 454 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 CALCAP01258 141 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 CAPN2P17655 700 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 GATA2P23769 480 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-211ENST00000466054 NSFP46459 744 aaKnown RBP3.39□□□□□ -1.87
LRCH3-211ENST00000466054 GSK3BP49841 420 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 GEMP55040 296 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 UBXN1Q04323 297 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 LASP1Q14847 261 aaKnown RBP3.39□□□□□ -1.87
LRCH3-211ENST00000466054 KRT31Q15323 416 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 P2RY14Q15391 338 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 VWA2Q5GFL6 755 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 AGAP7PQ5VUJ5 663 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 LIPJQ5W064 366 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 EMBQ6PCB8 327 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 TOM1L2Q6ZVM7 507 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 ITIH5Q86UX2 942 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 FAM9BQ8IZU0 186 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 SAMD12Q8N8I0 201 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 OR1K1Q8NGR3 316 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 OR4A16Q8NH70 328 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 ATP6V0A1Q93050 837 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 C16orf58Q96GQ5 468 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 RPGRIP1Q96KN7 1286 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 ATP6V0BQ99437 205 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 ZNF577Q9BSK1 485 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 RPP25Q9BUL9 199 aaKnown RBP3.39□□□□□ -1.87
LRCH3-211ENST00000466054 TRPV6Q9H1D0 765 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 ADNPQ9H2P0 1102 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 DPEP3Q9H4B8 488 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 DCLRE1BQ9H816 532 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 RPS10P5Q9NQ39 176 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 PIGVQ9NUD9 493 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 AKAP7Q9P0M2 348 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-211ENST00000466054 VPS54Q9P1Q0 977 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 APPL1Q9UKG1 709 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.39□□□□□ -1.87
LRCH3-211ENST00000466054 MRPL11Q9Y3B7 192 aaKnown RBP3.39□□□□□ -1.87
LRCH3-211ENST00000466054 CPQQ9Y646 472 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 SALL1Q9NSC2 1324 aa3.39□□□□□ -1.87
LRCH3-211ENST00000466054 A0A0U1RQG5 324 aaPredicted RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 MEI4A8MW99 385 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms