RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 POLR3HQ9Y535 204 aaPredicted RBP15.85■□□□□ 0.13
USP39-211ENST00000465282 ZNF780BQ9Y6R6 833 aa15.85■□□□□ 0.13
USP39-211ENST00000465282 ATXN7O15265 892 aaPredicted RBP15.84■□□□□ 0.13
USP39-211ENST00000465282 PEX11AO75192 247 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 PRKRAO75569 313 aaKnown RBP15.84■□□□□ 0.13
USP39-211ENST00000465282 IL3P08700 152 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 PRPS2P11908 318 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 TNNI3P19429 210 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 DDCP20711 480 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 EMX2Q04743 252 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 C2orf80Q0P641 193 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 Q0VFX4 171 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 AGAP7PQ5VUJ5 663 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 FAM71E1Q6IPT2 247 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 TCTN3Q6NUS6 607 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 FAM9CQ8IZT9 166 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 NFAM1Q8NET5 270 aaPredicted RBP15.84■□□□□ 0.13
USP39-211ENST00000465282 FDCSPQ8NFU4 85 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 THOC3Q96J01 351 aaKnown RBP15.84■□□□□ 0.13
USP39-211ENST00000465282 ART5Q96L15 291 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 AGAP4Q96P64 663 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 SMAD5Q99717 465 aaKnown RBP15.84■□□□□ 0.13
USP39-211ENST00000465282 NUF2Q9BZD4 464 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 ASIC5Q9NY37 505 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 MAPRE3Q9UPY8 281 aa15.84■□□□□ 0.13
USP39-211ENST00000465282 EIF3LQ9Y262 564 aaKnown RBP15.84■□□□□ 0.13
USP39-211ENST00000465282 CDK2AP1O14519 115 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 OR10H2O60403 315 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 DNAJB5O75953 348 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 TGDSO95455 350 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 JUNP05412 331 aaKnown RBP15.83■□□□□ 0.12
USP39-211ENST00000465282 FAM87AP0C7U9 286 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 BCKDHAP12694 445 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 PORP16435 677 aaPredicted RBP15.83■□□□□ 0.12
USP39-211ENST00000465282 SDC1P18827 310 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 CSNK2A2P19784 350 aaPredicted RBP15.83■□□□□ 0.12
USP39-211ENST00000465282 RPL3P39023 403 aaKnown RBP15.83■□□□□ 0.12
USP39-211ENST00000465282 ALDH9A1P49189 494 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 XKP51811 444 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 ERVK-8P63133 956 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 SPRED3Q2MJR0 410 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 VWA5B1Q5TIE3 1220 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 H3F3CQ6NXT2 135 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 WDR75Q8IWA0 830 aaKnown RBP15.83■□□□□ 0.12
USP39-211ENST00000465282 OR4N5Q8IXE1 308 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 FNDC5Q8NAU1 212 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 ELP5Q8TE02 316 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 PTPMT1Q8WUK0 201 aaPredicted RBP15.83■□□□□ 0.12
USP39-211ENST00000465282 MTERF3Q96E29 417 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 VMP1Q96GC9 406 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 ABHD17AQ96GS6 310 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 LMF1Q96S06 567 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 AKTIPQ9H8T0 292 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 MIEF1Q9NQG6 463 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 GIMAP4Q9NUV9 329 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 NOP53Q9NZM5 478 aaKnown RBP15.83■□□□□ 0.12
USP39-211ENST00000465282 HEY2Q9UBP5 337 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 TEKT2Q9UIF3 430 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 UTS2RQ9UKP6 389 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 ZNF451Q9Y4E5 1061 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 BOD1L1Q8NFC6 3051 aa15.83■□□□□ 0.12
USP39-211ENST00000465282 CPAMD8Q8IZJ3 1885 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 A6NL46 340 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 C17orf105B2RV13 164 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 TBX19O60806 448 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 ATP1B1P05026 303 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 CPMP14384 443 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 CLCN2P51788 898 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 GPR143P51810 404 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 PGDP52209 483 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 ID2Q02363 134 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 CRB2Q5IJ48 1285 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 OGFOD2Q6N063 350 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 LARP4Q71RC2 724 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP39-211ENST00000465282 R3HCC1LQ7Z5L2 792 aaKnown RBP15.82■□□□□ 0.12
USP39-211ENST00000465282 EXD3Q8N9H8 876 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 OR1N1Q8NGS0 311 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 C9orf43Q8TAL5 461 aaPredicted RBP15.82■□□□□ 0.12
USP39-211ENST00000465282 RIT1Q92963 219 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 KLHL29Q96CT2 875 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 ZNF552Q9H707 407 aaPredicted RBP15.82■□□□□ 0.12
USP39-211ENST00000465282 KCNK13Q9HB14 408 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 SLC35C2Q9NQQ7 365 aa15.82■□□□□ 0.12
USP39-211ENST00000465282 RYDENQ9NUL5 291 aaKnown RBP15.82■□□□□ 0.12
USP39-211ENST00000465282 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP39-211ENST00000465282 WASHC1A8K0Z3 465 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 A8MUA0 341 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 ERAL1O75616 437 aaKnown RBP15.81■□□□□ 0.12
USP39-211ENST00000465282 KITP10721 976 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 LBPP18428 481 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 TACR1P25103 407 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 MPIP34949 423 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 CEBPEQ15744 281 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 C6orf163Q5TEZ5 329 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 IL23RQ5VWK5 629 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 PCSK4Q6UW60 755 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 ISLR2Q6UXK2 745 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 SPATA19Q7Z5L4 167 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 LGI4Q8N135 537 aa15.81■□□□□ 0.12
USP39-211ENST00000465282 LRRC25Q8N386 305 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms