RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 IQCCQ4KMZ1 466 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 AFTPHQ6ULP2 937 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 STAC2Q6ZMT1 411 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 CLNKQ7Z7G1 428 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 TRIM42Q8IWZ5 723 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 NUBPLQ8TB37 319 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 UTP15Q8TED0 518 aaKnown RBP12□□□□□ -0.49
C9orf3-211ENST00000463372 KCTD4Q8WVF5 259 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 CTHRC1Q96CG8 243 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 CCDC177Q9NQR7 707 aaPredicted RBP12□□□□□ -0.49
C9orf3-211ENST00000463372 HEY2Q9UBP5 337 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 MRPS33Q9Y291 106 aaKnown RBP12□□□□□ -0.49
C9orf3-211ENST00000463372 CLDN16Q9Y5I7 305 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 SNX8Q9Y5X2 465 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 ESYT3A0FGR9 886 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 URADA6NGE7 173 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 VWC2LB2RUY7 222 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 C17orf105B2RV13 164 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 PIN1P1O15428 100 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 OR1F1O43749 312 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 GOT2P00505 430 aaKnown RBP11.99□□□□□ -0.49
C9orf3-211ENST00000463372 PECAM1P16284 738 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-211ENST00000463372 HNF4AP41235 474 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 RPS6KA1Q15418 735 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 FASTKD1Q53R41 847 aaKnown RBP11.99□□□□□ -0.49
C9orf3-211ENST00000463372 FNDC7Q5VTL7 733 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 OR14L1PQ8NHC6 308 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 P3H4Q92791 437 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 ANAPC5Q9UJX4 755 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
C9orf3-211ENST00000463372 IGHV4-61A0A0C4DH41 118 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 NDUFS8O00217 210 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 GNB5O14775 395 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 ALDOAP04075 364 aaKnown RBP11.98□□□□□ -0.49
C9orf3-211ENST00000463372 ZNF23P17027 643 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 ATP5DP30049 168 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 STARP49675 285 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 PDLIM4P50479 330 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 EFNA4P52798 201 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 ARFIP2P53365 341 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 NTRK2Q16620 822 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 BICRALQ6AI39 1079 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 C17orf64Q86WR6 236 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 LRRC56Q8IYG6 542 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-211ENST00000463372 OR4L1Q8NH43 312 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 QKIQ96PU8 341 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■■■□ 19.6
C9orf3-211ENST00000463372 SOX7Q9BT81 388 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 PCBD2Q9H0N5 130 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 OR10A4Q9H209 315 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 CBLN4Q9NTU7 201 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
C9orf3-211ENST00000463372 TEX10Q9NXF1 929 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-211ENST00000463372 VTI1BQ9UEU0 232 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 MYO6Q9UM54 1294 aa11.98□□□□□ -0.49
C9orf3-211ENST00000463372 MYOCOSA0A1B0GUC4 107 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 SYCE3A1L190 88 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 MROH6A6NGR9 719 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 KRT1P04264 644 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 PSMA3P25788 255 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 CTNNA2P26232 953 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 CDH11P55287 796 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 C21orf58P58505 322 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 UBXN1Q04323 297 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 BSPH1Q075Z2 132 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 KLHL30Q0D2K2 578 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 STX4Q12846 297 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 TFDP2Q14188 446 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 AARS2Q5JTZ9 985 aaKnown RBP11.97□□□□□ -0.49
C9orf3-211ENST00000463372 VAX1Q5SQQ9 334 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 AAGABQ6PD74 315 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 IFNEQ86WN2 208 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 HSCBQ8IWL3 235 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 ZNF595Q8IYB9 648 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 TBC1D19Q8N5T2 526 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 OR1J4Q8NGS1 313 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 NT5CQ8TCD5 201 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 TMEM41AQ96HV5 264 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 PPP1R2P1Q96PQ5 205 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 ALOXE3Q9BYJ1 711 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
C9orf3-211ENST00000463372 GPR52Q9Y2T5 361 aa11.97□□□□□ -0.49
C9orf3-211ENST00000463372 LRRC53A6NM62 1247 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 CAPN14A8MX76 684 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 HACD1B0YJ81 288 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 CST8O60676 142 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 HKR1P10072 659 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 COL6A2P12110 1019 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 CDH1P12830 882 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 KCNC1P48547 511 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 LHX2P50458 406 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 HNRNPFP52597 415 aaKnown RBP11.96□□□□□ -0.49
C9orf3-211ENST00000463372 TBPL1P62380 186 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 SEMA3AQ14563 771 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 RPS6KA2Q15349 733 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 TIGD3Q6B0B8 471 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 SHQ1Q6PI26 577 aaKnown RBP11.96□□□□□ -0.49
C9orf3-211ENST00000463372 C1QL4Q86Z23 238 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 CCDC50Q8IVM0 306 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 C9orf40Q8IXQ3 194 aa11.96□□□□□ -0.49
C9orf3-211ENST00000463372 LINC01356Q8N9X3 169 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms