RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 FAM153BP0C7A2 387 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 CD22P20273 847 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 HSPA7P48741 367 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 ID2Q02363 134 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 ASPHQ12797 758 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 BIKQ13323 160 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 TBCCQ15814 346 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 ZNF791Q3KP31 576 aaPredicted RBP18.25■□□□□ 0.51
VARS-221ENST00000463184 FAM153CQ494X1 144 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 TMEM35AQ53FP2 167 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 TRMT10CQ7L0Y3 403 aaKnown RBP18.25■□□□□ 0.51
VARS-221ENST00000463184 TGIF2LYQ8IUE0 185 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 CTAGE3PQ8IX95 158 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 SLC15A4Q8N697 577 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 SLC22A8Q8TCC7 542 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 ESAMQ96AP7 390 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 SENP5Q96HI0 755 aaPredicted RBP18.25■□□□□ 0.51
VARS-221ENST00000463184 MS4A8Q9BY19 250 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 POLDIP3Q9BY77 421 aaKnown RBP18.25■□□□□ 0.51
VARS-221ENST00000463184 SH2D2AQ9NP31 389 aa18.25■□□□□ 0.51
VARS-221ENST00000463184 CCM2LQ9NUG4 571 aaPredicted RBP18.25■□□□□ 0.51
VARS-221ENST00000463184 RYDENQ9NUL5 291 aaKnown RBP18.25■□□□□ 0.51
VARS-221ENST00000463184 PRRC2AP48634 2157 aaKnown RBP18.25■□□□□ 0.51
VARS-221ENST00000463184 DYRK3O43781 588 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 PIAS1O75925 651 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 SCELO95171 688 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 ACSL3O95573 720 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 HIST1H1TP22492 207 aaPredicted RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 CPN2P22792 545 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 PIGAP37287 484 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 GP5P40197 560 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 MSH2P43246 934 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 STT3AP46977 705 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 IGLV3-21P80748 117 aaPredicted RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 IRF8Q02556 426 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 CHIT1Q13231 466 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 ERCC6LQ2NKX8 1250 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 AP5B1Q2VPB7 878 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 FBXO48Q5FWF7 155 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 WDR93Q6P2C0 686 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 CHSY3Q70JA7 882 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 WDR53Q7Z5U6 358 aaPredicted RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 GSPT2Q8IYD1 628 aaKnown RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 ZZZ3Q8IYH5 903 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 DND1Q8IYX4 353 aaKnown RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 SPATA6LQ8N4H0 392 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 PPM1NQ8N819 430 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 PDPRQ8NCN5 879 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 PAQR8Q8TEZ7 354 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 ZNF473Q8WTR7 871 aaKnown RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 UBE2E3Q969T4 207 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 TSPAN17Q96FV3 270 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 RBM18Q96H35 190 aaKnown RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 DGAT2Q96PD7 388 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 CNPPD1Q9BV87 410 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 TXLNGYQ9BZA5 131 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 CD274Q9NZQ7 290 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.24■□□□□ 0.51
VARS-221ENST00000463184 ST6GALNAC2Q9UJ37 374 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 PTBP2Q9UKA9 531 aaKnown RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 BOKQ9UMX3 212 aaPredicted RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 EDARQ9UNE0 448 aa18.24■□□□□ 0.51
VARS-221ENST00000463184 V9GYY5 206 aaPredicted RBP18.24■□□□□ 0.51
VARS-221ENST00000463184 IGKV3-11P04433 115 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 CCDC166P0CW27 439 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 CD1DP15813 335 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 ENDOUP21128 410 aaKnown RBP18.23■□□□□ 0.51
VARS-221ENST00000463184 CASP2P42575 452 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 KIR2DL3P43628 341 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 ATP6V0D1P61421 351 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 E2F2Q14209 437 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 GRTP1Q5TC63 336 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 ADGRD1Q6QNK2 874 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 C9orf40Q8IXQ3 194 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 SPACA9Q96E40 222 aaPredicted RBP18.23■□□□□ 0.51
VARS-221ENST00000463184 ART5Q96L15 291 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 ACSS3Q9H6R3 686 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 PRM3Q9NNZ6 103 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 ZFP64Q9NPA5 681 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 ACKR4Q9NPB9 350 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 ZNF358Q9NW07 568 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 MS4A12Q9NXJ0 267 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 QPCTLQ9NXS2 382 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 SPRR3Q9UBC9 169 aa18.23■□□□□ 0.51
VARS-221ENST00000463184 MTO1Q9Y2Z2 717 aaKnown RBP18.23■□□□□ 0.51
VARS-221ENST00000463184 A0A087WUV0 522 aaPredicted RBP18.22■□□□□ 0.51
VARS-221ENST00000463184 HSPB2A8KAH6 182 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 RTCAO00442 366 aaKnown RBP18.22■□□□□ 0.51
VARS-221ENST00000463184 SYT5O00445 386 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 FGF17O60258 216 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 CCNT2O60583 730 aaKnown RBP18.22■□□□□ 0.51
VARS-221ENST00000463184 ABHD2P08910 425 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 EPORP19235 508 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 SPRP35270 261 aaPredicted RBP18.22■□□□□ 0.51
VARS-221ENST00000463184 VSNL1P62760 191 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 PPP2R2AP63151 447 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 KCNJ2P63252 427 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 OR4D1Q15615 310 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 HSPB2Q16082 182 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 UBAP2Q5T6F2 1119 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms