RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 STMN4Q9H169 189 aaPredicted RBP14.44□□□□□ -0.1
SND1-203ENST00000463020 SLC24A3Q9HC58 644 aa14.44□□□□□ -0.1
SND1-203ENST00000463020 PRDM7Q9NQW5 492 aa14.44□□□□□ -0.1
SND1-203ENST00000463020 VTI1BQ9UEU0 232 aa14.44□□□□□ -0.1
SND1-203ENST00000463020 ZNF490Q9ULM2 529 aaPredicted RBP14.44□□□□□ -0.1
SND1-203ENST00000463020 VWA7Q9Y334 891 aa14.44□□□□□ -0.1
SND1-203ENST00000463020 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.44□□□□□ -0.1
SND1-203ENST00000463020 ARHGAP21Q5T5U3 1957 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 RTCAO00442 366 aaKnown RBP14.43□□□□□ -0.1
SND1-203ENST00000463020 CTNSO60931 367 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 WDR47O94967 919 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 NUDT17P0C025 328 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 ZNF37AP17032 561 aaPredicted RBP14.43□□□□□ -0.1
SND1-203ENST00000463020 AGFG1P52594 562 aaKnown RBP14.43□□□□□ -0.1
SND1-203ENST00000463020 TSNQ15631 228 aaKnown RBP14.43□□□□□ -0.1
SND1-203ENST00000463020 DEFB113Q30KQ7 82 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 KRT71Q3SY84 523 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 PIGGQ5H8A4 983 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 TMIGD1Q6UXZ0 262 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 TRMT10CQ7L0Y3 403 aaKnown RBP14.43□□□□□ -0.1
SND1-203ENST00000463020 PRIMA1Q86XR5 153 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 OR4N5Q8IXE1 308 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 OR2L5Q8NG80 312 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 OR14A16Q8NHC5 309 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 LINC01560Q8TB33 94 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 FBXO25Q8TCJ0 367 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 ESAMQ96AP7 390 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 SARAFQ96BY9 339 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 PDLIM5Q96HC4 596 aaKnown RBP14.43□□□□□ -0.1
SND1-203ENST00000463020 MDFIQ99750 246 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 TRIM54Q9BYV2 358 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 REXO4Q9GZR2 422 aaKnown RBP14.43□□□□□ -0.1
SND1-203ENST00000463020 EXO5Q9H790 373 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 PLEKHF2Q9H8W4 249 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 KCNE2Q9Y6J6 123 aa14.43□□□□□ -0.1
SND1-203ENST00000463020 NCF1BA6NI72 391 aaPredicted RBP14.42□□□□□ -0.1
SND1-203ENST00000463020 NCF1CA8MVU1 366 aaPredicted RBP14.42□□□□□ -0.1
SND1-203ENST00000463020 KIAA1324LA8MWY0 1029 aaPredicted RBP14.42□□□□□ -0.1
SND1-203ENST00000463020 TAPBPO15533 448 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 HCN1O60741 890 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 P04436 131 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 NCF1P14598 390 aaPredicted RBP14.42□□□□□ -0.1
SND1-203ENST00000463020 HOXC12P31275 282 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 ZNF136P52737 540 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 ACSF3Q4G176 576 aaPredicted RBP14.42□□□□□ -0.1
SND1-203ENST00000463020 SPANXN3Q5MJ09 141 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 PPIL6Q8IXY8 311 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 SPATA6LQ8N4H0 392 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 GOT1L1Q8NHS2 421 aaPredicted RBP14.42□□□□□ -0.1
SND1-203ENST00000463020 PPWD1Q96BP3 646 aaKnown RBP14.42□□□□□ -0.1
SND1-203ENST00000463020 RHBDF1Q96CC6 855 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 ARSGQ96EG1 525 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 SERINC2Q96SA4 455 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 PRDM4Q9UKN5 801 aa14.42□□□□□ -0.1
SND1-203ENST00000463020 PABPN1LA6NDY0 278 aaKnown RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 FGF17O60258 216 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 SH3BGRLO75368 114 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 PRKRAO75569 313 aaKnown RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 RAF1P04049 648 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 IGKV3-11P04433 115 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 EPORP19235 508 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 CEACAM8P31997 349 aaPredicted RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 ASCL1P50553 236 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 MTTPP55157 894 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 DAZAP2Q15038 168 aaPredicted RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 BBS9Q3SYG4 887 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 DCST1Q5T197 706 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 BICRALQ6AI39 1079 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 FAM45BPQ6NSW5 357 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 OPN5Q6U736 354 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 CHSY3Q70JA7 882 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 GALNT7Q86SF2 657 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 LRRC25Q8N386 305 aaPredicted RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 VWA5B2Q8N398 1253 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 OR10G3Q8NGC4 313 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 OR8K3Q8NH51 312 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 OR2W6PQ8NHA6 318 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 NEIL3Q8TAT5 605 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 FAM45AQ8TCE6 357 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 PAQR8Q8TEZ7 354 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 FAM222BQ8WU58 562 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 DAZLQ92904 295 aaKnown RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 RNASE6Q93091 150 aaKnown RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 CFAP36Q96G28 342 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 SGCZQ96LD1 299 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 EGFL8Q99944 293 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 TMEM109Q9BVC6 243 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 SORBS1Q9BX66 1292 aaKnown RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 OARD1Q9Y530 152 aa14.41□□□□□ -0.1
SND1-203ENST00000463020 CHCHD2Q9Y6H1 151 aaPredicted RBP14.41□□□□□ -0.1
SND1-203ENST00000463020 WASHC1A8K0Z3 465 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 EIF3HO15372 352 aaKnown RBP eCLIP14.4□□□□□ -0.15e-20■□□□□ 8.2
SND1-203ENST00000463020 CLEC3AO75596 197 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 PIAS1O75925 651 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 GNAZP19086 355 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 TNNI3P19429 210 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 GMPRP36959 345 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 HNRNPH2P55795 449 aaKnown RBP14.4□□□□□ -0.1
SND1-203ENST00000463020 TAS2R39P59534 338 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 CRYZQ08257 329 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms