RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HIPK1Q86Z02 1210 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 PM20D2Q8IYS1 436 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 FAM47BQ8NA70 645 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 TRPV3Q8NET8 790 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 EEF1AKMT1Q8WVE0 214 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 SLC5A11Q8WWX8 675 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 SREK1Q8WXA9 508 aaKnown RBP7.04□□□□□ -1.28
SMC3-202ENST00000462899 MS4A6EQ96DS6 147 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 G6PC3Q9BUM1 346 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 SFXN3Q9BWM7 321 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 UGT2B28Q9BY64 529 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 FRMD8P1Q9BZ68 369 aaPredicted RBP7.04□□□□□ -1.28
SMC3-202ENST00000462899 LACRTQ9GZZ8 138 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 PELI2Q9HAT8 420 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 FBXO6Q9NRD1 293 aaPredicted RBP7.04□□□□□ -1.28
SMC3-202ENST00000462899 BFARQ9NZS9 450 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 C6orf203Q9P0P8 240 aaPredicted RBP7.04□□□□□ -1.28
SMC3-202ENST00000462899 COMMD10Q9Y6G5 202 aa7.04□□□□□ -1.28
SMC3-202ENST00000462899 MALRD1Q5VYJ5 2156 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 SYCE3A1L190 88 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 ANKRD33BA6NCL7 494 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 LRIT2A6NDA9 550 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 A6NHS1 94 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 A8MXE2 369 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 MIF4GDA9UHW6 222 aaKnown RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 C17orf105B2RV13 164 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 AKR1B15C9JRZ8 316 aaPredicted RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 GOLGA6L19H0YKK7 550 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 AP3B1O00203 1094 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 CES2O00748 559 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 CTNSO60931 367 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 TNFSF13O75888 250 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 RCBTB2O95199 551 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 TPM3P06753 285 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 TMIGD3P0DMS9 266 aaPredicted RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 TPSB2P20231 275 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 CDK9P50750 372 aaKnown RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 LIM2P55344 173 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 AP1S2P56377 157 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 KCNJ2P63252 427 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 BTN3A2P78410 334 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 ASPHQ12797 758 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 SLC13A2Q13183 592 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 TNK1Q13470 666 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 BMPR2Q13873 1038 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 TPSAB1Q15661 275 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 NTRK2Q16620 822 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 SYDE1Q6ZW31 735 aaPredicted RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 VN1R5Q7Z5H4 357 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMC3-202ENST00000462899 CCDC170Q8IYT3 715 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 DND1Q8IYX4 353 aaKnown RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 LIX1Q8N485 282 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 SLC15A4Q8N697 577 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 OR10G3Q8NGC4 313 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 OR5L2Q8NGL0 311 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 ZPLD1Q8TCW7 415 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 FBXL8Q96CD0 374 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 HES6Q96HZ4 224 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 ZFP3Q96NJ6 502 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 SECISBP2Q96T21 854 aaKnown RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 PIGQQ9BRB3 760 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 OR8D2Q9GZM6 311 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 CNIH4Q9P003 139 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 CLCF1Q9UBD9 225 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 AMFRQ9UKV5 643 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 DAPP1Q9UN19 280 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 ZNF148Q9UQR1 794 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 EIF3LQ9Y262 564 aaKnown RBP7.03□□□□□ -1.28
SMC3-202ENST00000462899 WIF1Q9Y5W5 379 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 CLCA3PQ9Y6N3 262 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 MGAM2Q2M2H8 2515 aa7.03□□□□□ -1.28
SMC3-202ENST00000462899 PRKDCP78527 4128 aaKnown RBP7.02□□□□□ -1.29
SMC3-202ENST00000462899 PCNX3Q9H6A9 2034 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 A0A087X1B8 175 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 A0A0G2JN53 185 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 MYOCOSA0A1B0GUC4 107 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 GOLGA6L22H0YM25 854 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 HRKO00198 91 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 PHF1O43189 567 aaPredicted RBP7.02□□□□□ -1.29
SMC3-202ENST00000462899 ERI3O43414 337 aaKnown RBP7.02□□□□□ -1.29
SMC3-202ENST00000462899 CBFA2T2O43439 604 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 CD5LO43866 347 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 ERN1O75460 977 aaKnown RBP7.02□□□□□ -1.29
SMC3-202ENST00000462899 HAUS5O94927 633 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 LRATO95237 230 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 CLPSP04118 112 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 TPM1P09493 284 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 GDF1P27539 372 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 MAGEA6P43360 314 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 CDK16Q00536 496 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 CSHL1Q14406 222 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 SF3B4Q15427 424 aaKnown RBP eCLIP7.02□□□□□ -1.291e-6■■■■□ 19.5
SMC3-202ENST00000462899 PPP1R3AQ16821 1122 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 KRTAP24-1Q3LI83 254 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 DRICH1Q6PGQ1 229 aaPredicted RBP7.02□□□□□ -1.29
SMC3-202ENST00000462899 PAQR3Q6TCH7 311 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 NXPE4Q6UWF7 544 aa7.02□□□□□ -1.29
SMC3-202ENST00000462899 SBSNQ6UWP8 590 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms