RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 ATG4DQ86TL0 474 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 PLD3Q8IV08 490 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 SLC25A41Q8N5S1 370 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 MORN4Q8NDC4 146 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 ADCY4Q8NFM4 1077 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 NUBPLQ8TB37 319 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 ATL1Q8WXF7 558 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 SMPDL3AQ92484 453 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 PKP4Q99569 1192 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 MACROD1Q9BQ69 325 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 OCSTAMPQ9BR26 566 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 GATA5Q9BWX5 397 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 C1QTNF5Q9BXJ0 243 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 STK33Q9BYT3 514 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 EIF2B3Q9NR50 452 aaKnown RBP6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 PNO1Q9NRX1 252 aaKnown RBP6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 PARVAQ9NVD7 372 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 WWOXQ9NZC7 414 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 RCOR1Q9UKL0 485 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 PMF1-BGLAPU3KQ54 211 aa6.11□□□□□ -1.43
TRAPPC10-205ENST00000461889 ARFGEF3Q5TH69 2177 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 A0A0A6YYK5 440 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 DNAJC9-AS1A6NH13 148 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 E7EQL1 145 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 STK10O94804 968 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TJP3O95049 919 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 FBXO45P0C2W1 286 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 FPR2P25090 351 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 SERPINB3P29508 390 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TLX1P31314 330 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 ARHGAP25P42331 645 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TNNT3P45378 269 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 NDUFA8P51970 172 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 GFRA1P56159 465 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 CLDN18P56856 261 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 GBE1Q04446 702 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 CHRNB3Q05901 458 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 HSPA14Q0VDF9 509 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 BMPR2Q13873 1038 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 ITIH4Q14624 930 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 ARHGAP19Q14CB8 494 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 RABEP1Q15276 862 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TOMM20Q15388 145 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 ELAVL1Q15717 326 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TAB1Q15750 504 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 BCL2A1Q16548 175 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 CCSMST1Q4G0I0 132 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 ZNF362Q5T0B9 420 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 ZNF544Q6NX49 715 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 RBMS3Q6XE24 437 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 DOK3Q7L591 496 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 YRDCQ86U90 279 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TRIM42Q8IWZ5 723 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 MCOLN2Q8IZK6 566 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 OR10G3Q8NGC4 313 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 OR6K3Q8NGY3 331 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 FAM110DQ8TAY7 271 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 MAGEC3Q8TD91 643 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 DAZLQ92904 295 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TMIGD2Q96BF3 282 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 S100PBPQ96BU1 408 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 C1orf147Q96MC9 270 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 USB1Q9BQ65 265 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 CEP41Q9BYV8 373 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 C12orf49Q9H741 205 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 HOMER3Q9NSC5 361 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 GAR1Q9NY12 217 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 SMARCAL1Q9NZC9 954 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 UBP1Q9NZI7 540 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 TAC3Q9UHF0 121 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 RSPH14Q9UHP6 348 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 MOKQ9UQ07 419 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 CSMD3Q7Z407 3707 aa6.1□□□□□ -1.43
TRAPPC10-205ENST00000461889 LOC105371242A0A075B767 164 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 GOLGA6L10A0A0M3HER8 536 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 GOLGA6L10A6NI86 522 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 GOLGA6L19H0YKK7 550 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 H7C0S8 307 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 SNUPNO95149 360 aaKnown RBP6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 PNPP00491 289 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 OR56A5P0C7T3 313 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 RNH1P13489 461 aaKnown RBP6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 UCHL3P15374 230 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 TCF4P15884 667 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 HRH2P25021 359 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 PPP2R1BP30154 601 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 MC4RP32245 332 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 KHKP50053 298 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 ZNF140P52738 457 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 CSE1LP55060 971 aaKnown RBP6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 OLR1P78380 273 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 IRF9Q00978 393 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 ASPHQ12797 758 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 CUL4AQ13619 759 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 RUNX2Q13950 521 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 P2RY6Q15077 328 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 NTRK2Q16620 822 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 CTU2Q2VPK5 515 aaKnown RBP6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 TEX44Q53QW1 395 aa6.09□□□□□ -1.43
TRAPPC10-205ENST00000461889 FAM182AQ5T1J6 154 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms