RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TPP2P29144 1249 aaPredicted RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 HTR6P50406 440 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 HNRNPFP52597 415 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 FOXA1P55317 472 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 HNRNPH2P55795 449 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TBL3Q12788 808 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TERF2Q15554 542 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 MEP1AQ16819 746 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SCIMPQ6UWF3 145 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ZCCHC23Q6ZST2 131 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CLNKQ7Z7G1 428 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 KIRREL3Q8IZU9 778 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SLC5A8Q8N695 610 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 C1orf52Q8N6N3 182 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TMEM52Q8NDY8 209 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 DAZLQ92904 295 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 RBM18Q96H35 190 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 METTL2AQ96IZ6 378 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 HBEGFQ99075 208 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 FAIM2Q9BWQ8 316 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ACPTQ9BZG2 426 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 MMP25Q9NPA2 562 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ADAP2Q9NPF8 381 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 VTI1BQ9UEU0 232 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 MCM8Q9UJA3 840 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ERRFI1Q9UJM3 462 aaPredicted RBP12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PSME2Q9UL46 239 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 OSGIN2Q9Y236 505 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CLCA3PQ9Y6N3 262 aa12.37□□□□□ -0.43
RAB11FIP3-207ENST00000461009 COL12A1Q99715 3063 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 A0A1W2PR48 441 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TMEM120BA0PK00 339 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SAGE2PA6NJ88 616 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TMEM114B3SHH9 223 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CDK2AP1O14519 115 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PRAMEF2O60811 474 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 LDB3O75112 727 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 RSL1D1O76021 490 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 HSPA4LO95757 839 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 GPR75O95800 540 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CELA2AP08217 269 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 DHRS4L1P0CG22 281 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 COX7A2P14406 83 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 GSTM5P46439 218 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SLC26A5P58743 744 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 HMGCS1Q01581 520 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 BTKQ06187 659 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 RBPJQ06330 500 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 STX3Q13277 289 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ELAVL1Q15717 326 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CHI3L2Q15782 390 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ACER2Q5QJU3 275 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 NDUFAF5Q5TEU4 345 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 C18orf63Q68DL7 685 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CLEC6AQ6EIG7 209 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 OR52E8Q6IFG1 317 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 RNF165Q6ZSG1 346 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 MAMDC2Q7Z304 686 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TRIM42Q8IWZ5 723 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 FAM76AQ8TAV0 307 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ANKRD9Q96BM1 317 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 DGAT2Q96PD7 388 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CCT7Q99832 543 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 UTP23Q9BRU9 249 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PELOQ9BRX2 385 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ACBD3Q9H3P7 528 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SIRT5Q9NXA8 310 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 FIS1Q9Y3D6 152 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PTPN13Q12923 2485 aa12.36□□□□□ -0.43
RAB11FIP3-207ENST00000461009 GNG14A0A1W2PPG7 69 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 C1orf226A1L170 272 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 A1L4Q6 167 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 LRRTM2O43300 516 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PCDH7O60245 1069 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SEC22BO75396 215 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 F10P00742 488 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 LDLRP01130 860 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CHRNGP07510 517 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CD46P15529 392 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CHN1P15882 459 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PIK3R1P27986 724 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ABCE1P61221 599 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 MPP2Q14168 576 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SH2D4BQ5SQS7 431 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 KANK2Q63ZY3 851 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 GALNT18Q6P9A2 607 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 DDIASQ8IXT1 998 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 FAM98AQ8NCA5 519 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 B3GNT7Q8NFL0 401 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 OR4K14Q8NGD5 310 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 OR6Y1Q8NGX8 325 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 OR14A16Q8NHC5 309 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 NR4A3Q92570 626 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TM4SF18Q96CE8 201 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 APIPQ96GX9 242 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ATP6V1G3Q96LB4 118 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SLX1AQ9BQ83 275 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms