RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SDCCAG3Q96C92 435 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 CCDC126Q96EE4 140 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 FAR2Q96K12 515 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 ZNF354BQ96LW1 612 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 MAPKAP1Q9BPZ7 522 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 YIPF2Q9BWQ6 316 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 SORBS1Q9BX66 1292 aaKnown RBP12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 BRF2Q9HAW0 419 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 NECTIN3Q9NQS3 549 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 ASB4Q9Y574 426 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 SPG11Q96JI7 2443 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 DNHD1Q96M86 4753 aa12.72□□□□□ -0.37
SCAMP4-206ENST00000460767 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 FBN3Q75N90 2809 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 IGHV3-20A0A0C4DH32 117 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 COPEO14579 308 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 PRRG2O14669 202 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ASNA1O43681 348 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 SUPT7LO94864 414 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ESRRBO95718 433 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 PCNAP12004 261 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 DRD2P14416 443 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ABOP16442 354 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 TSPAN8P19075 237 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 MAOAP21397 527 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 MSX1P28360 303 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 IST1P53990 364 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 FOLH1Q04609 750 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 SRSF11Q05519 484 aaKnown RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 GALNT1Q10472 559 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 TBL3Q12788 808 aaKnown RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 TUBA3CQ13748 450 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ACER2Q5QJU3 275 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 BEND6Q5SZJ8 279 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 TUBA3EQ6PEY2 450 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 NCCRP1Q6ZVX7 275 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 MILR1Q7Z6M3 343 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 DMRTC2Q8IXT2 367 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 LGI4Q8N135 537 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 BEST3Q8N1M1 668 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 FAM98AQ8NCA5 519 aaKnown RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ELP5Q8TE02 316 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 TRPC4APQ8TEL6 797 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ASB5Q8WWX0 329 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 METTL21AQ8WXB1 218 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 RGMAQ96B86 450 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 NPAS2Q99743 824 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 TNFRSF12AQ9NP84 129 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 MMP25Q9NPA2 562 aa12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 FARSBQ9NSD9 589 aaKnown RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-206ENST00000460767 ZNF469Q96JG9 3925 aaPredicted RBP12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 CCDC151A5D8V7 595 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 TMEM200CA6NKL6 621 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 TMPRSS11DO60235 418 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 B4GALT2O60909 372 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 CTNSO60931 367 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 EEDO75530 441 aaKnown RBP12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 OR4F21O95013 312 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 MYL2P10916 166 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 KLK2P20151 261 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 PKNOX1P55347 436 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 HNRNPH2P55795 449 aaKnown RBP12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 SLC26A5P58743 744 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 SFT2D3Q587I9 215 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 TCHHL1Q5QJ38 904 aaPredicted RBP12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 RNF165Q6ZSG1 346 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 METTL4Q8N3J2 472 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 APCDD1LQ8NCL9 501 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 M1APQ8TC57 530 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 ANKRD9Q96BM1 317 aaPredicted RBP12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 PTCHD1Q96NR3 888 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 SIGLEC12Q96PQ1 595 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 SERPINI1Q99574 410 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 SSU72Q9NP77 194 aaKnown RBP12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 ADAM29Q9UKF5 820 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 GTF3C1Q12789 2109 aa12.7□□□□□ -0.38
SCAMP4-206ENST00000460767 TLDC2A0PJX2 215 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 SYNDIG1LA6NDD5 238 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 SAGE2PA6NJ88 616 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 NPIPA5E9PKD4 350 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 NPIPB8E9PQR5 432 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 MANBAO00462 879 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 PROM1O43490 865 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 SEC24DO94855 1032 aaPredicted RBP12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 PDYNP01213 254 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 ENO1P06733 434 aaKnown RBP12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 HOXD4P09016 255 aaPredicted RBP12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 HSD3B1P14060 373 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 CPA3P15088 417 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 CD46P15529 392 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 HSD3B2P26439 372 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 TPP2P29144 1249 aaPredicted RBP12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 NAGLUP54802 743 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 FOXA1P55317 472 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 PPP2R2AP63151 447 aa12.69□□□□□ -0.38
SCAMP4-206ENST00000460767 TNFRSF17Q02223 184 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms