RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 OR10H2O60403 315 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 ULK1O75385 1050 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 LDLRP01130 860 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 MYL2P10916 166 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 GALNSP34059 522 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 CRHR1P34998 444 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 PKNOX1P55347 436 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 PER3P56645 1201 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 KCNK10P57789 538 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 LCP2Q13094 533 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.35■■□□□ 1.01
PTPN4-208ENST00000460289 POGLUT1Q8NBL1 392 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 FBXL20Q96IG2 436 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 FRMD6Q96NE9 622 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 TIMMDC1Q9NPL8 285 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 HPF1Q9NWY4 346 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 VPS29Q9UBQ0 182 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 EMCNQ9ULC0 261 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 G3V2L1 256 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 WWP2O00308 870 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 MANBAO00462 879 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 ZNF500O60304 480 aaPredicted RBP21.34■■□□□ 1.01
PTPN4-208ENST00000460289 SLC35E2P0CK97 266 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 PIK3R1P27986 724 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 HMOX2P30519 316 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 HK2P52789 917 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 MAPK12P53778 367 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 SRSF11Q05519 484 aaKnown RBP21.34■■□□□ 1.01
PTPN4-208ENST00000460289 ZYG11AQ6WRX3 759 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 C16orf47Q6ZP98 133 aaPredicted RBP21.34■■□□□ 1.01
PTPN4-208ENST00000460289 COMMD6Q7Z4G1 85 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 EPS8L3Q8TE67 593 aaKnown RBP21.34■■□□□ 1.01
PTPN4-208ENST00000460289 RIT1Q92963 219 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 RASL10BQ96S79 203 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 TEX10Q9NXF1 929 aaPredicted RBP21.34■■□□□ 1.01
PTPN4-208ENST00000460289 ZGRF1Q86YA3 2104 aa21.34■■□□□ 1.01
PTPN4-208ENST00000460289 WASHC1A8K0Z3 465 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 FOXO6A8MYZ6 492 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 COPEO14579 308 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 PGRMC2O15173 223 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 PROCP04070 461 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 IGKV3-11P04433 115 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 ENO1P06733 434 aaKnown RBP21.33■■□□□ 1.01
PTPN4-208ENST00000460289 KRT4P19013 534 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 VSNL1P62760 191 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 TBL3Q12788 808 aaKnown RBP21.33■■□□□ 1.01
PTPN4-208ENST00000460289 CSTF3Q12996 717 aaKnown RBP21.33■■□□□ 1.01
PTPN4-208ENST00000460289 SPRED3Q2MJR0 410 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 NDUFAF5Q5TEU4 345 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 IL20RBQ6UXL0 311 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 DGAT2L6Q6ZPD8 337 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 SULF2Q8IWU5 870 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 CCNYL1Q8N7R7 359 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 GBP7Q8N8V2 638 aaPredicted RBP21.33■■□□□ 1.01
PTPN4-208ENST00000460289 OR4K14Q8NGD5 310 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 NUBPLQ8TB37 319 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 RDH11Q8TC12 318 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 GPR137Q96N19 417 aa21.33■■□□□ 1.01
PTPN4-208ENST00000460289 NPIPA5E9PKD4 350 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 SLU7O95391 586 aaKnown RBP21.32■■□□□ 1
PTPN4-208ENST00000460289 ESRRBO95718 433 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 ZNF24P17028 368 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 GALNT1Q10472 559 aaPredicted RBP21.32■■□□□ 1
PTPN4-208ENST00000460289 ZNF267Q14586 743 aaPredicted RBP21.32■■□□□ 1
PTPN4-208ENST00000460289 MPEG1Q2M385 716 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 OPN5Q6U736 354 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 MDGA2Q7Z553 956 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 CPSF7Q8N684 471 aaKnown RBP21.32■■□□□ 1
PTPN4-208ENST00000460289 UCN3Q969E3 161 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 RELTQ969Z4 430 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 CNPPD1Q9BV87 410 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 GSTO2Q9H4Y5 243 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 RYDENQ9NUL5 291 aaKnown RBP21.32■■□□□ 1
PTPN4-208ENST00000460289 NPIPA1Q9UND3 350 aa21.32■■□□□ 1
PTPN4-208ENST00000460289 TLDC2A0PJX2 215 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 C1orf226A1L170 272 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 H3BQF6 201 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 PEX1O43933 1283 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 PLIN3O60664 434 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 OR6B1O95007 311 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 NUDT17P0C025 328 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 RNF224P0DH78 156 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 SOX3P41225 446 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 MEOX1P50221 254 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 XKP51811 444 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 TRA2BP62995 288 aaKnown RBP21.31■■□□□ 1
PTPN4-208ENST00000460289 C1orf52Q8N6N3 182 aaKnown RBP21.31■■□□□ 1
PTPN4-208ENST00000460289 CCDC63Q8NA47 563 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 PSD4Q8NDX1 1056 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 SREK1Q8WXA9 508 aaKnown RBP21.31■■□□□ 1
PTPN4-208ENST00000460289 SGCZQ96LD1 299 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 HBEGFQ99075 208 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 PLEKHB1Q9UF11 243 aaPredicted RBP21.31■■□□□ 1
PTPN4-208ENST00000460289 PSME2Q9UL46 239 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 PCDHA9Q9Y5H5 950 aa21.31■■□□□ 1
PTPN4-208ENST00000460289 HRKO00198 91 aa21.3■■□□□ 1
PTPN4-208ENST00000460289 ASNA1O43681 348 aa21.3■■□□□ 1
PTPN4-208ENST00000460289 CPA3P15088 417 aa21.3■■□□□ 1
PTPN4-208ENST00000460289 DEKP35659 375 aaKnown RBP21.3■■□□□ 1
PTPN4-208ENST00000460289 CASP6P55212 293 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms