RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 HCSTQ9UBK5 93 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 BMPR1AP36894 532 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 MAGEA12P43365 314 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 ADAM8P78325 824 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF181Q2M3W8 571 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 KXD1Q9BQD3 176 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 RTP3Q9BQQ7 232 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 C2orf92A0A1B0GVN3 265 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 SH3D21A4FU49 640 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 CLCA1A8K7I4 914 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF670-ZNF695F2Z2N8 137 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 TPD52L2O43399 206 aaKnown RBP14.1□□□□□ -0.15
PTPRU-205ENST00000460170 UGT3A2Q3SY77 523 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 OR8K5Q8NH50 307 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 OR52P1PQ8NH57 321 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 PFDN2Q9UHV9 154 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 SOBPA7XYQ1 873 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 VLDLRP98155 873 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 RPA4Q13156 261 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 FLYWCH1Q4VC44 716 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 YIPF7Q8N8F6 280 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 SECISBP2Q96T21 854 aaKnown RBP14.1□□□□□ -0.15
PTPRU-205ENST00000460170 BCL7BQ9BQE9 202 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 DPAGT1Q9H3H5 408 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 CLMPQ9H6B4 373 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 SFXN1Q9H9B4 322 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 POLE4Q9NR33 117 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 SARDHQ9UL12 918 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 C2orf74A8MZ97 194 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 RNGTTO60942 597 aaKnown RBP14.1□□□□□ -0.15
PTPRU-205ENST00000460170 APLP1P51693 650 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 TAS2R38P59533 333 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 PHC1P78364 1004 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF267Q14586 743 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-205ENST00000460170 SMCO1Q147U7 214 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 ABHD11Q8NFV4 315 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 METTL2AQ96IZ6 378 aaKnown RBP14.1□□□□□ -0.15
PTPRU-205ENST00000460170 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 BLOC1S5-TXNDC5H3BN57 136 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 CST6Q15828 149 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 GTF2IRD2BQ6EKJ0 949 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 BORAQ6PGQ7 559 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 GTF2IRD2Q86UP8 949 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 LHFPL3Q86UP9 236 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 TRIM73Q86UV7 250 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 AMIGO1Q86WK6 493 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 LRRC25Q8N386 305 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-205ENST00000460170 NEIL3Q8TAT5 605 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 C15orf40Q8WUR7 153 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 NKD1Q969G9 470 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 NEIL2Q969S2 332 aa14.1□□□□□ -0.15
PTPRU-205ENST00000460170 RNASET2O00584 256 aaKnown RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 ITIH1P19827 911 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 CNR2P34972 360 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 PCGF2P35227 344 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 KEAP1Q14145 624 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 GK3PQ14409 553 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 LILRA2Q8N149 483 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 ASB11Q8WXH4 323 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 GNG8Q9UK08 70 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 MAGED1Q9Y5V3 778 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 CSF2P04141 144 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 AGXTP21549 392 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 AOAHP28039 575 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 GCGRP47871 477 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SLC22A15Q8IZD6 547 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SLC15A4Q8N697 577 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 OR4K5Q8NGD3 323 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 EGLN2Q96KS0 407 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 TM9SF2Q99805 663 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 CHIAQ9BZP6 476 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SMURF1Q9HCE7 757 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 HSFX1Q9UBD0 423 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 BCAS1O75363 584 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 KLF8O95600 359 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 ARSAP15289 507 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 GABRA3P34903 492 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 MICAQ29983 383 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SLC29A4Q7RTT9 530 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 KLHDC8AQ8IYD2 350 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 PAPD5Q8NDF8 572 aaKnown RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 NEK7Q8TDX7 302 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 JPH3Q8WXH2 748 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SLC46A2Q9BY10 475 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 PCDHGA8Q9Y5G5 932 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 C7orf72A4D263 438 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 VILLO15195 856 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SLC7A9P82251 487 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 RUNX3Q13761 415 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 UAP1L1Q3KQV9 507 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SYCE2Q6PIF2 218 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF550Q7Z398 422 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 GPR149Q86SP6 731 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 CHERPQ8IWX8 916 aaKnown RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 TESCQ96BS2 214 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 ERMAPQ96PL5 475 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF300Q96RE9 604 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 RC3H2Q9HBD1 1191 aaKnown RBP14.09□□□□□ -0.15
PTPRU-205ENST00000460170 EIF3KQ9UBQ5 218 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms