RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TMEM236Q5W0B7 351 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ADNP2Q6IQ32 1131 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 FAM83HQ6ZRV2 1179 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 C6orf120Q7Z4R8 191 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 VN1R5Q7Z5H4 357 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 GRASPQ7Z6J2 395 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 C11orf96Q7Z7L8 435 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ZNF547Q8IVP9 402 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 CYP4Z2PQ8N1L4 340 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 OR9Q2Q8NGE9 314 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 OR52J3Q8NH60 311 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 OR5AK3PQ8NH89 298 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 WDR36Q8NI36 951 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 APOBEC4Q8WW27 367 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 AP3S1Q92572 193 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 GTPBP3Q969Y2 492 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 TM4SF18Q96CE8 201 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 TMEM19Q96HH6 336 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 TXNDC15Q96J42 360 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 PRRC1Q96M27 445 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SAMD11Q96NU1 681 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 COQ7Q99807 217 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 MYOCQ99972 504 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 TIMM29Q9BSF4 260 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 POLDIP3Q9BY77 421 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ROGDIQ9GZN7 287 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 C6orf62Q9GZU0 229 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 NUAK2Q9H093 628 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 POLR2J3Q9H1A7 115 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 TMEM245Q9H330 911 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 MVB12BQ9H7P6 319 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 EVA1AQ9H8M9 152 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SLC25A19Q9HC21 320 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ZBTB20Q9HC78 741 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 PRDM9Q9NQV7 894 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 PHPT1Q9NRX4 125 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 TAC3Q9UHF0 121 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SLC13A4Q9UKG4 626 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 STUB1Q9UNE7 303 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ENTPD4Q9Y227 616 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 LIPT1Q9Y234 373 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 KLHL20Q9Y2M5 609 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 GPC6Q9Y625 555 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 PMF1-BGLAPU3KQ54 211 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 A0A0A6YYD5 115 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 LOC100506127A0A0U1RQW1 187 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 HIDE1A8MVS5 230 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 H3BN98 237 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SAP18O00422 153 aaKnown RBP8.39□□□□□ -1.07
HDAC3-202ENST00000459727 PCDH17O14917 1159 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SLC28A2O43868 658 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 TLL1O43897 1013 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SH3BGRLO75368 114 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 RAB36O95755 333 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 PTHP01270 115 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 GASTP01350 101 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 FHP07954 510 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 NR2F1P10589 423 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 DBTP11182 482 aaKnown RBP8.39□□□□□ -1.07
HDAC3-202ENST00000459727 MYL12AP19105 171 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 FSHRP23945 695 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 ELAVL4P26378 380 aaKnown RBP8.39□□□□□ -1.07
HDAC3-202ENST00000459727 CNR2P34972 360 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 GPC1P35052 558 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SSR2P43308 183 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 RAB28P51157 221 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 RORCP51449 518 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 LIMK1P53667 647 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 CDK3Q00526 305 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 TP53BP2Q13625 1128 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF234Q14588 700 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SLC9A5Q14940 896 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SPHARQ15513 63 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 MED22Q15528 200 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 POM121L1PQ3SYA9 428 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 ATAD3BQ5T9A4 648 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 OR4C11Q6IEV9 310 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 KIAA1161Q6NSJ0 714 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 TMCO2Q7Z6W1 182 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-202ENST00000459727 AKAP14Q86UN6 197 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 TRIM74Q86UV6 250 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SLC22A16Q86VW1 577 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 HEATR4Q86WZ0 1026 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 LYSMD2Q8IV50 215 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 FAM26EQ8N5C1 309 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 HORMAD2Q8N7B1 307 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 CLDN22Q8N7P3 220 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SCAIQ8N9R8 606 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 OR5AR1Q8NGP9 310 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 OR2L8Q8NGY9 312 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SPPL3Q8TCT6 385 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 RPL3LQ92901 407 aaKnown RBP8.39□□□□□ -1.07
HDAC3-202ENST00000459727 WDFY2Q96P53 400 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SLC38A2Q96QD8 506 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SLC30A2Q9BRI3 323 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 CHCHD6Q9BRQ6 235 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 FNDC11Q9BVV2 318 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 SARGQ9BW04 601 aa8.39□□□□□ -1.07
HDAC3-202ENST00000459727 TAPBPLQ9BX59 468 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms