RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 LRFN1Q9P244 771 aa19.3■□□□□ 0.68
VARS-218ENST00000459667 GOLGA6L10A6NI86 522 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 PGRMC2O15173 223 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 OR10H2O60403 315 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 TRIM13O60858 407 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 ITGA10O75578 1167 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 CREB1P16220 341 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 PIK3R1P27986 724 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 TRHRP34981 398 aaPredicted RBP19.29■□□□□ 0.68
VARS-218ENST00000459667 CYB561P49447 251 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 HMGCS1Q01581 520 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 MRPL49Q13405 166 aaKnown RBP19.29■□□□□ 0.68
VARS-218ENST00000459667 SCIMPQ6UWF3 145 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 DGAT2L6Q6ZPD8 337 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 HORMAD2Q8N7B1 307 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 BCORP1Q8N888 145 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 ZNF721Q8TF20 911 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 CHTF18Q8WVB6 975 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 FAR1Q8WVX9 515 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 PGM2Q96G03 612 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 ART5Q96L15 291 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 C5orf34Q96MH7 638 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 TAAR6Q96RI8 345 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 GATA5Q9BWX5 397 aaPredicted RBP19.29■□□□□ 0.68
VARS-218ENST00000459667 SHCBP1LQ9BZQ2 653 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 RRAGDQ9NQL2 400 aaPredicted RBP19.29■□□□□ 0.68
VARS-218ENST00000459667 ARGLU1Q9NWB6 273 aaPredicted RBP19.29■□□□□ 0.68
VARS-218ENST00000459667 MCM8Q9UJA3 840 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 PCDHGB6Q9Y5F9 930 aa19.29■□□□□ 0.68
VARS-218ENST00000459667 C1orf226A1L170 272 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 SERTM1A2A2V5 107 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 CTIFO43310 598 aaKnown RBP19.28■□□□□ 0.68
VARS-218ENST00000459667 NEURL1O76050 574 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 RASAL1O95294 804 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 CD46P15529 392 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 ALDH3A1P30838 453 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 HLCSP50747 726 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 ACSM2AQ08AH3 577 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 SPIN4Q56A73 249 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 ACSM2BQ68CK6 577 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 TMEM178AQ8NBL3 297 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 OR4K14Q8NGD5 310 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 OR8K3Q8NH51 312 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 APIPQ96GX9 242 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 SENP5Q96HI0 755 aaPredicted RBP19.28■□□□□ 0.68
VARS-218ENST00000459667 MECRQ9BV79 373 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 HES7Q9BYE0 225 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 LIN28AQ9H9Z2 209 aaKnown RBP19.28■□□□□ 0.68
VARS-218ENST00000459667 SSU72Q9NP77 194 aaKnown RBP19.28■□□□□ 0.68
VARS-218ENST00000459667 TNFRSF12AQ9NP84 129 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 KLHL1Q9NR64 748 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 OLAHQ9NV23 265 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 PCDHA9Q9Y5H5 950 aa19.28■□□□□ 0.68
VARS-218ENST00000459667 A0A1W2PS29 197 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 TMEM200CA6NKL6 621 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 PCDH7O60245 1069 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 SLC25A12O75746 678 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 SLC35E2P0CK97 266 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 SSR4P51571 173 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 TRA2BP62995 288 aaKnown RBP19.27■□□□□ 0.68
VARS-218ENST00000459667 RNF4P78317 190 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 IMPG1Q17R60 797 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 SPRED3Q2MJR0 410 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 SLC48A1Q6P1K1 146 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 C16orf47Q6ZP98 133 aaPredicted RBP19.27■□□□□ 0.68
VARS-218ENST00000459667 TMEM156Q8N614 296 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 DOK4Q8TEW6 326 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 TM4SF18Q96CE8 201 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 SCMH1Q96GD3 660 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 FBXL20Q96IG2 436 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 TRMOQ9BU70 441 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 CNPPD1Q9BV87 410 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 FAIM2Q9BWQ8 316 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 TRIM45Q9H8W5 580 aaPredicted RBP19.27■□□□□ 0.68
VARS-218ENST00000459667 MYOTQ9UBF9 498 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 YARS2Q9Y2Z4 477 aaKnown RBP19.27■□□□□ 0.68
VARS-218ENST00000459667 ACTL7BQ9Y614 415 aa19.27■□□□□ 0.68
VARS-218ENST00000459667 PRRC2CQ9Y520 2896 aaKnown RBP19.27■□□□□ 0.68
VARS-218ENST00000459667 RP1L1Q8IWN7 2480 aaPredicted RBP19.27■□□□□ 0.67
VARS-218ENST00000459667 GNG14A0A1W2PPG7 69 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 HRKO00198 91 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 TYROBPO43914 113 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 CBX6O95503 412 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 IGKV3-11P04433 115 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 SP1P08047 785 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 UROSP10746 265 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 SERPINB3P29508 390 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 TIA1P31483 386 aaKnown RBP eCLIP19.26■□□□□ 0.67
VARS-218ENST00000459667 GALNSP34059 522 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 HK2P52789 917 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 ERVK-8P63133 956 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 RAE1P78406 368 aaKnown RBP19.26■□□□□ 0.67
VARS-218ENST00000459667 BTKQ06187 659 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 ELOAQ14241 798 aaKnown RBP19.26■□□□□ 0.67
VARS-218ENST00000459667 ZNF267Q14586 743 aaPredicted RBP19.26■□□□□ 0.67
VARS-218ENST00000459667 SPDYAQ5MJ70 313 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 CLEC6AQ6EIG7 209 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 SLC25A25Q6KCM7 469 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 HOMEZQ8IX15 550 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 MMP21Q8N119 569 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms