RNA–Protein interactions for RNA: ENST00000458264.1

LINC01248-201, Transcript of long intergenic non-protein coding RNA 1248, humanhuman

TSL 3 BASIC

Gene LINC01248, Length 468 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01248-201ENST00000458264 ACKR4Q9NPB9 350 aa13.67□□□□□ -0.22
LINC01248-201ENST00000458264 IGSF5Q9NSI5 407 aa13.67□□□□□ -0.22
LINC01248-201ENST00000458264 DNAJB12Q9NXW2 375 aaKnown RBP13.67□□□□□ -0.22
LINC01248-201ENST00000458264 SPRR3Q9UBC9 169 aa13.67□□□□□ -0.22
LINC01248-201ENST00000458264 OPTCQ9UBM4 332 aa13.67□□□□□ -0.22
LINC01248-201ENST00000458264 PHF11Q9UIL8 331 aa13.67□□□□□ -0.22
LINC01248-201ENST00000458264 PHF3Q92576 2039 aaKnown RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 MED13LQ71F56 2210 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 IQANK1A0A1B0GTG1 560 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 TCRBV9S1A1TA0A576 114 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 FAM159BA6NKW6 160 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 HSPB2A8KAH6 182 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 SAP18O00422 153 aaKnown RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 CTAG2O75638 210 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 GSTA2P09210 222 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 ENDOUP21128 410 aaKnown RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 SERPINB3P29508 390 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 SPRP35270 261 aaPredicted RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 RAP1GDS1P52306 607 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 ARFIP1P53367 373 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 GNG11P61952 73 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 CALCOCO2Q13137 446 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 HSPB2Q16082 182 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 GRTP1Q5TC63 336 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 GRHL2Q6ISB3 625 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 DGAT2L6Q6ZPD8 337 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 C3orf62Q6ZUJ4 267 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 SLC29A4Q7RTT9 530 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 WDR53Q7Z5U6 358 aaPredicted RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 ISCA2Q86U28 154 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 ST13P4Q8IZP2 240 aaPredicted RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 LRRC25Q8N386 305 aaPredicted RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 ZCCHC7Q8N3Z6 543 aaKnown RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 UBTD2Q8WUN7 234 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 NRGNQ92686 78 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 NAPGQ99747 312 aaPredicted RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 FOXC2Q99958 501 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 SORBS1Q9BX66 1292 aaKnown RBP13.66□□□□□ -0.22
LINC01248-201ENST00000458264 RNF14Q9UBS8 474 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 ZNF407Q9C0G0 2248 aa13.66□□□□□ -0.22
LINC01248-201ENST00000458264 FAM221AA4D161 298 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 SUPT3HB4E1H0 165 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 HRKO00198 91 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 SYT5O00445 386 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 KERAO60938 352 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 SUPT3HO75486 399 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 FBXO45P0C2W1 286 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 RFPL3SP0C7P2 107 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 CD99P14209 185 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 EPB42P16452 691 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 BUD31P41223 144 aaPredicted RBP13.65□□□□□ -0.22
LINC01248-201ENST00000458264 PIK3CBP42338 1070 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 KIR2DL3P43628 341 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 DDX39BQ13838 428 aaKnown RBP13.65□□□□□ -0.22
LINC01248-201ENST00000458264 SPRED3Q2MJR0 410 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 PRAMEF20Q5VT98 475 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 C18orf63Q68DL7 685 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 RNF111Q6ZNA4 994 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 RAPH1Q70E73 1250 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 TBC1D1Q86TI0 1168 aaPredicted RBP13.65□□□□□ -0.22
LINC01248-201ENST00000458264 CTAGE3PQ8IX95 158 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 ZZZ3Q8IYH5 903 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 ULK2Q8IYT8 1036 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 LIX1Q8N485 282 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 FAM13CQ8NE31 585 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 CHDHQ8NE62 594 aaPredicted RBP13.65□□□□□ -0.22
LINC01248-201ENST00000458264 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 NEIL3Q8TAT5 605 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 ATOH8Q96SQ7 321 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 TMUB1Q9BVT8 246 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 POLDIP3Q9BY77 421 aaKnown RBP13.65□□□□□ -0.22
LINC01248-201ENST00000458264 CXXC4Q9H2H0 198 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 PROK2Q9HC23 129 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 WHRNQ9P202 907 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 TSC22D4Q9Y3Q8 395 aa13.65□□□□□ -0.22
LINC01248-201ENST00000458264 CHCHD2Q9Y6H1 151 aaPredicted RBP13.65□□□□□ -0.22
LINC01248-201ENST00000458264 INTS1Q8N201 2190 aaKnown RBP13.64□□□□□ -0.23
LINC01248-201ENST00000458264 FAM187AA6NFU0 413 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 LRRC3CA6NJW4 275 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 OR6C76A6NM76 312 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 UBXN8O00124 270 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 PLPP1O14494 284 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 PROM1O43490 865 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 OR10H2O60403 315 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 GPR75O95800 540 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 SLC35E2BP0CK96 405 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 PTX3P26022 381 aaPredicted RBP13.64□□□□□ -0.23
LINC01248-201ENST00000458264 CRABP2P29373 138 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 GALNSP34059 522 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 HNRNPH2P55795 449 aaKnown RBP13.64□□□□□ -0.23
LINC01248-201ENST00000458264 HERVK_113P63132 956 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 ERVK-8P63133 956 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 PHEXP78562 749 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 DLG1Q12959 904 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 ZNF267Q14586 743 aaPredicted RBP13.64□□□□□ -0.23
LINC01248-201ENST00000458264 TBCELQ5QJ74 424 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 TAGAPQ8N103 731 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 OR10G3Q8NGC4 313 aa13.64□□□□□ -0.23
LINC01248-201ENST00000458264 RIT1Q92963 219 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms