RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 HOXC12P31275 282 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 TIMP3P35625 211 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 SLC6A12P48065 614 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 KCNC1P48547 511 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 TRPC1P48995 793 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 C18orf21Q32NC0 220 aaPredicted RBP13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 ZNF662Q6ZS27 426 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 CHSY3Q70JA7 882 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 LACC1Q8IV20 430 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 SLC15A4Q8N697 577 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 GRK7Q8WTQ7 553 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 KCNC2Q96PR1 638 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 YIPF4Q9BSR8 244 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 PRDM7Q9NQW5 492 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 TRMT1Q9NXH9 659 aaKnown RBP13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 GPRC5BQ9NZH0 403 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 CTNNAL1Q9UBT7 734 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 DNHD1Q96M86 4753 aa13.19□□□□□ -0.3
UPF3AP2-201ENST00000457924 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 CLGNO14967 610 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 GOSR1O95249 250 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 SERPINB3P29508 390 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 CDC25BP30305 580 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 WNT3P56703 355 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 DCAF7P61962 342 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 ID2Q02363 134 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 PPP1R7Q15435 360 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 CYP1B1Q16678 543 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 TMEM198Q66K66 360 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 ADAMTSL2Q86TH1 951 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 RASGEF1CQ8N431 466 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 FAM13CQ8NE31 585 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 SRFBP1Q8NEF9 429 aaKnown RBP13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 RHBDF1Q96CC6 855 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 HSPBAP1Q96EW2 488 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 SENP5Q96HI0 755 aaPredicted RBP13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 ART5Q96L15 291 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 DGAT2Q96PD7 388 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 F2RL3Q96RI0 385 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 MAPKAP1Q9BPZ7 522 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 DOHHQ9BU89 302 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 EHD1Q9H4M9 534 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 PLEKHF2Q9H8W4 249 aa13.18□□□□□ -0.3
UPF3AP2-201ENST00000457924 HRNRQ86YZ3 2850 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 NCF1BA6NI72 391 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 CLCA1A8K7I4 914 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 NCF1CA8MVU1 366 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 HEXAP06865 529 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 NCF1P14598 390 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 CPN2P22792 545 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 GDF1P27539 372 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 MSH2P43246 934 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 STT3AP46977 705 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 ZNF136P52737 540 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 NKX6-1P78426 367 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 SORDQ00796 357 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 DUSP8Q13202 625 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 PCBP2Q15366 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 ADNP2Q6IQ32 1131 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 POMZP3Q6PJE2 187 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 IGDCC3Q8IVU1 814 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 PM20D2Q8IYS1 436 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 TCAIMQ8N3R3 496 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 ACOT4Q8N9L9 421 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 OR10G3Q8NGC4 313 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 LINC01560Q8TB33 94 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 ANKRD9Q96BM1 317 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 PTCD3Q96EY7 689 aaKnown RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 CFAP36Q96G28 342 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 RBM18Q96H35 190 aaKnown RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 MS4A14Q96JA4 679 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 TBCDQ9BTW9 1192 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 EPB41L4BQ9H329 900 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 ZNF490Q9ULM2 529 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 CHCHD2Q9Y6H1 151 aaPredicted RBP13.17□□□□□ -0.3
UPF3AP2-201ENST00000457924 VPS13CQ709C8 3753 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 KDM4EB2RXH2 506 aaPredicted RBP13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 FGF17O60258 216 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 TRAPPC6AO75865 159 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 C1QAP02745 245 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 IGKV3-11P04433 115 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 ATP5A1P25705 553 aaKnown RBP13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 CRYZQ08257 329 aaKnown RBP13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 BIKQ13323 160 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 LAPTM5Q13571 262 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 ZNF460Q14592 562 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 TSNQ15631 228 aaKnown RBP13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 HIST2H2ACQ16777 129 aaPredicted RBP13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 AP5B1Q2VPB7 878 aa13.16□□□□□ -0.3
UPF3AP2-201ENST00000457924 PAGE2BQ5JRK9 111 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms