RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 GPRC5BQ9NZH0 403 aa13.61□□□□□ -0.23
UBE2F-219ENST00000455999 MTRF1LQ9UGC7 380 aaKnown RBP13.61□□□□□ -0.23
UBE2F-219ENST00000455999 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
UBE2F-219ENST00000455999 AHRRA9YTQ3 701 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 PGRMC1O00264 195 aaKnown RBP13.6□□□□□ -0.23
UBE2F-219ENST00000455999 SAP18O00422 153 aaKnown RBP13.6□□□□□ -0.23
UBE2F-219ENST00000455999 PRKRAO75569 313 aaKnown RBP13.6□□□□□ -0.23
UBE2F-219ENST00000455999 EPORP19235 508 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 HPDP32754 393 aaPredicted RBP13.6□□□□□ -0.23
UBE2F-219ENST00000455999 TIMP3P35625 211 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 MSH2P43246 934 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 KCNC1P48547 511 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 DCAF7P61962 342 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 TGM3Q08188 693 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 STEAP4Q687X5 459 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 BICRALQ6AI39 1079 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 CSPG4Q6UVK1 2322 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 CLEC9AQ6UXN8 241 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 TMEM64Q6YI46 380 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 LACC1Q8IV20 430 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 GRK7Q8WTQ7 553 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 ARSGQ96EG1 525 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 WDR34Q96EX3 536 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 KCNC2Q96PR1 638 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 TBCDQ9BTW9 1192 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 DOHHQ9BU89 302 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 CAPS2Q9BXY5 557 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 DDX47Q9H0S4 455 aaKnown RBP13.6□□□□□ -0.23
UBE2F-219ENST00000455999 EHD1Q9H4M9 534 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 QPCTLQ9NXS2 382 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 ZNF629Q9UEG4 869 aaPredicted RBP13.6□□□□□ -0.23
UBE2F-219ENST00000455999 SLC6A5Q9Y345 797 aa13.6□□□□□ -0.23
UBE2F-219ENST00000455999 WASHC1A8K0Z3 465 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 CLCA1A8K7I4 914 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 PIAS1O75925 651 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 ACSL3O95573 720 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 TGFB1P01137 390 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 IL2RAP01589 272 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 C1QAP02745 245 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 FBXO45P0C2W1 286 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 COX7A2P14406 83 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 IVDP26440 423 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 FNTAP49354 379 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 HERVK_113P63132 956 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 ERVK-8P63133 956 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 CHIT1Q13231 466 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 DCST1Q5T197 706 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 C18orf63Q68DL7 685 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 MAATS1Q7Z4T9 603 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 PRIMA1Q86XR5 153 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 ANKMY2Q8IV38 441 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 VWA5B2Q8N398 1253 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 BBOF1Q8ND07 529 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
UBE2F-219ENST00000455999 PTCD3Q96EY7 689 aaKnown RBP13.59□□□□□ -0.23
UBE2F-219ENST00000455999 ERVK-6Q9BXR3 956 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 CNIH4Q9P003 139 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 FOXD3Q9UJU5 478 aaPredicted RBP13.59□□□□□ -0.23
UBE2F-219ENST00000455999 CAMK2AQ9UQM7 478 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 ERVK-19Q9WJR5 959 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 TEX264Q9Y6I9 313 aa13.59□□□□□ -0.23
UBE2F-219ENST00000455999 CHD3Q12873 2000 aaKnown RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 GOLGA6L6A8MZA4 724 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 TRIM3O75382 744 aaPredicted RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 STK16O75716 305 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 SCELO95171 688 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 WISP3O95389 354 aaPredicted RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 HRGP04196 525 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 CD53P19397 219 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 HIST1H1TP22492 207 aaPredicted RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 SERPINB3P29508 390 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 GGT5P36269 586 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 GMPRP36959 345 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 SSR2P43308 183 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 ZNF267Q14586 743 aaPredicted RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 OR4D1Q15615 310 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 PDK4Q16654 411 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 AP5B1Q2VPB7 878 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 TAOK1Q7L7X3 1001 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 SLC15A4Q8N697 577 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 SRFBP1Q8NEF9 429 aaKnown RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 DIO2Q92813 273 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 RBM18Q96H35 190 aaKnown RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 FBXL20Q96IG2 436 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 ZNF597Q96LX8 424 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 TRIB1Q96RU8 372 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 KRT12Q99456 494 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 MDFIQ99750 246 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 EFCAB11Q9BUY7 163 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 ROGDIQ9GZN7 287 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 WWTR1Q9GZV5 400 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 PRDM14Q9GZV8 571 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.24
UBE2F-219ENST00000455999 CAB39LQ9H9S4 337 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 NEUROD4Q9HD90 331 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 PRM3Q9NNZ6 103 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 SPACA6W5XKT8 324 aa13.58□□□□□ -0.24
UBE2F-219ENST00000455999 PRR14LQ5THK1 2151 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms