RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 DEFB126Q9BYW3 111 aa12.5□□□□□ -0.41
PSMC4-202ENST00000455878 MCCC2Q9HCC0 563 aa12.5□□□□□ -0.41
PSMC4-202ENST00000455878 URADA6NGE7 173 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 TMEM233B4DJY2 109 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 PSMD12O00232 456 aaPredicted RBP12.49□□□□□ -0.41
PSMC4-202ENST00000455878 KLF11O14901 512 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 TFECO14948 347 aaPredicted RBP12.49□□□□□ -0.41
PSMC4-202ENST00000455878 ZNHIT1O43257 154 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 NME2P1O60361 137 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 GALR3O60755 368 aaPredicted RBP12.49□□□□□ -0.41
PSMC4-202ENST00000455878 CLDN9O95484 217 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 ALOX12P18054 663 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 NME2P22392 152 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 HLCSP50747 726 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 PKNOX1P55347 436 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 NAA20P61599 178 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 HSF1Q00613 529 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 PCDH1Q08174 1060 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 E2F2Q14209 437 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 TBCCQ15814 346 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 TCHHL1Q5QJ38 904 aaPredicted RBP12.49□□□□□ -0.41
PSMC4-202ENST00000455878 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 GRHL2Q6ISB3 625 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 MILR1Q7Z6M3 343 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 CPSF7Q8N684 471 aaKnown RBP12.49□□□□□ -0.41
PSMC4-202ENST00000455878 ZNF781Q8N8C0 355 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 CDYL2Q8N8U2 506 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 L3MBTL4Q8NA19 623 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 OR4K1Q8NGD4 311 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 PTCD3Q96EY7 689 aaKnown RBP12.49□□□□□ -0.41
PSMC4-202ENST00000455878 ENKD1Q9H0I2 346 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 SLCO1B3Q9NPD5 702 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 LANCL2Q9NS86 450 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 TRPS1Q9UHF7 1281 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 STK38LQ9Y2H1 464 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 MTORP42345 2549 aa12.49□□□□□ -0.41
PSMC4-202ENST00000455878 CDC40O60508 579 aaKnown RBP eCLIP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 UGDHO60701 494 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 ESRRBO95718 433 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 TPOP07202 933 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 CASP2P42575 452 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 HTR6P50406 440 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 MLF1P58340 268 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 OLR1P78380 273 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 OCRLQ01968 901 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 CPSF6Q16630 551 aaKnown RBP eCLIP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 GGTA1PQ4G0N0 100 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 SH2D4BQ5SQS7 431 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 ZNF468Q5VIY5 522 aaPredicted RBP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 LIPJQ5W064 366 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 CLEC6AQ6EIG7 209 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 NCCRP1Q6ZVX7 275 aaPredicted RBP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 KIF2BQ8N4N8 673 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 AFAP1L2Q8N4X5 818 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 ASB5Q8WWX0 329 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 AIF1LQ9BQI0 150 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 EFCAB11Q9BUY7 163 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 CLK4Q9HAZ1 481 aaKnown RBP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 ZDHHC2Q9UIJ5 367 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 FIS1Q9Y3D6 152 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 TIMM22Q9Y584 194 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 CACNA1CQ13936 2221 aa12.48□□□□□ -0.41
PSMC4-202ENST00000455878 MAP1AP78559 2803 aaPredicted RBP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 NCOA6Q14686 2063 aaPredicted RBP12.48□□□□□ -0.41
PSMC4-202ENST00000455878 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 A0A1B0GTH9 108 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 TRBC2A0A5B9 178 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 A8MUA0 341 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 CRCPO75575 148 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 SERPINB3P29508 390 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 TRHRP34981 398 aaPredicted RBP12.47□□□□□ -0.41
PSMC4-202ENST00000455878 HNF4AP41235 474 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 GALNT1Q10472 559 aaPredicted RBP12.47□□□□□ -0.41
PSMC4-202ENST00000455878 RBBP5Q15291 538 aaKnown RBP12.47□□□□□ -0.41
PSMC4-202ENST00000455878 PAGE2BQ5JRK9 111 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 RNFT1Q5M7Z0 435 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 KANK2Q63ZY3 851 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 MED27Q6P2C8 311 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 PAOXQ6QHF9 649 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 SPNS3Q6ZMD2 512 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 RGS9BPQ6ZS82 235 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 FAM47EQ6ZV65 393 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 RNF175Q8N4F7 328 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 ANKRD53Q8N9V6 530 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 FAM57AQ8TBR7 257 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 DMRTA2Q96SC8 542 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 RHBGQ9H310 441 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 CCDC134Q9H6E4 229 aa12.47□□□□□ -0.41
PSMC4-202ENST00000455878 TRIM45Q9H8W5 580 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms