RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 OR8K3Q8NH51 312 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 SUN3Q8TAQ9 357 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 SLC2A12Q8TD20 617 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 CHTF18Q8WVB6 975 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 DGAT2Q96PD7 388 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 PSMG3-AS1Q96PY0 264 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 FAM111AQ96PZ2 611 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 TAAR6Q96RI8 345 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 KCNA7Q96RP8 456 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 SLX1AQ9BQ83 275 aa16.14■□□□□ 0.17
USP39-208ENST00000455732 MYOCOSA0A1B0GUC4 107 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 FCHO1O14526 889 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 TYROBPO43914 113 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 ZFAND5O76080 213 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 CHN1P15882 459 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 CD96P40200 585 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 FOXA1P55317 472 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 SPRED3Q2MJR0 410 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 SPIN4Q56A73 249 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 FAM180AQ6UWF9 173 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 OR4N5Q8IXE1 308 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 C1orf52Q8N6N3 182 aaKnown RBP16.13■□□□□ 0.17
USP39-208ENST00000455732 HORMAD2Q8N7B1 307 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 PRR7Q8TB68 274 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 TCP10LQ8TDR4 215 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 C11orf24Q96F05 449 aaPredicted RBP16.13■□□□□ 0.17
USP39-208ENST00000455732 RBM18Q96H35 190 aaKnown RBP16.13■□□□□ 0.17
USP39-208ENST00000455732 GATA5Q9BWX5 397 aaPredicted RBP16.13■□□□□ 0.17
USP39-208ENST00000455732 SIRT5Q9NXA8 310 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 SLC17A7Q9P2U7 560 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 MCM8Q9UJA3 840 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 TIMM22Q9Y584 194 aa16.13■□□□□ 0.17
USP39-208ENST00000455732 GLOD5A6NK44 160 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 RGS16O15492 202 aaPredicted RBP16.12■□□□□ 0.17
USP39-208ENST00000455732 DYRK3O43781 588 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 SPAG7O75391 227 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 NEURL1O76050 574 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 AGFG2O95081 481 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 IGKV3-11P04433 115 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 SLC35E2P0CK97 266 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 EDN3P14138 238 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 TNNI3P19429 210 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 ALDH3A1P30838 453 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 OR1C1Q15619 314 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 TNFAIP8L3Q5GJ75 292 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 GALNT18Q6P9A2 607 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 LRIG3Q6UXM1 1119 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 HSDL2Q6YN16 418 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 RNF165Q6ZSG1 346 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 TRIM46Q7Z4K8 759 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 CROCCP2Q86T23 111 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 HOMEZQ8IX15 550 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 BCORP1Q8N888 145 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 ZNF721Q8TF20 911 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 SCMH1Q96GD3 660 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 FBXL20Q96IG2 436 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 ART5Q96L15 291 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 SIGLEC12Q96PQ1 595 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 OR8D2Q9GZM6 311 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 SSU72Q9NP77 194 aaKnown RBP16.12■□□□□ 0.17
USP39-208ENST00000455732 TNFRSF12AQ9NP84 129 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 COPS7AQ9UBW8 275 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 PCDHA9Q9Y5H5 950 aa16.12■□□□□ 0.17
USP39-208ENST00000455732 C1orf226A1L170 272 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 TMEM200CA6NKL6 621 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 WASHC1A8K0Z3 465 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 PGRMC2O15173 223 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 PRKNO60260 465 aaPredicted RBP16.11■□□□□ 0.17
USP39-208ENST00000455732 NPHS1O60500 1241 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 CRCPO75575 148 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 RNF224P0DH78 156 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 UROSP10746 265 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 CREB1P16220 341 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 ETV4P43268 484 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 CYB561P49447 251 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 HLCSP50747 726 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 TDGF1P3P51864 188 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 HMGCS1Q01581 520 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 GTF3C1Q12789 2109 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 ZNF766Q5HY98 468 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 SLC48A1Q6P1K1 146 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 MYO7BQ6PIF6 2116 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 DGAT2L6Q6ZPD8 337 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 ZNF321PQ8N8H1 164 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 UCN3Q969E3 161 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 TM4SF18Q96CE8 201 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 SENP5Q96HI0 755 aaPredicted RBP16.11■□□□□ 0.17
USP39-208ENST00000455732 ZIM3Q96PE6 472 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 OLAHQ9NV23 265 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 LRFN1Q9P244 771 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 MYOTQ9UBF9 498 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 CES1P1Q9UKY3 287 aa16.11■□□□□ 0.17
USP39-208ENST00000455732 YARS2Q9Y2Z4 477 aaKnown RBP16.11■□□□□ 0.17
USP39-208ENST00000455732 EML6Q6ZMW3 1958 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 NPIPB8E9PQR5 432 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 PCDH7O60245 1069 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 OR10H2O60403 315 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 ERLIN1O75477 346 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 ITGA10O75578 1167 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 RSL1D1O76021 490 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms