RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 MIR1-1HGQ9H1L0 117 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GLIPR2Q9H4G4 154 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 KLHL31Q9H511 634 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 EXD2Q9NVH0 621 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 TEX10Q9NXF1 929 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PDP2Q9P2J9 529 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 MUTYHQ9UIF7 546 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SATB2Q9UPW6 733 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 MMACHCQ9Y4U1 282 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PCDHGA5Q9Y5G8 931 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 COL5A1P20908 1838 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 NUP210LQ5VU65 1888 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 NUP214P35658 2090 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 C5orf58C9J3I9 102 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 CLDN4O14493 209 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 COQ9O75208 318 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 TIPRLO75663 272 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PRKD3O94806 890 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GPR75O95800 540 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 FABP3P05413 133 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GSNP06396 782 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 TFPTP0C1Z6 253 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC35E2P0CK97 266 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PORP16435 677 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 BCKDHBP21953 392 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 EPHA8P29322 1005 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 LCN1P31025 176 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 DNAJA1P31689 397 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GPC1P35052 558 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 CRATP43155 626 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 AVPR1BP47901 424 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GABRA4P48169 554 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ALDH9A1P49189 494 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 NCBP2P52298 156 aaKnown RBP eCLIP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 CRISP3P54108 245 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 RAD23AP54725 363 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 HSD11B2P80365 405 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 MC1RQ01726 317 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 FOLH1Q04609 750 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SERTAD2Q14140 314 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 NR0B2Q15466 257 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PLK5Q496M5 336 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GTDC1Q4AE62 458 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 EXOSC6Q5RKV6 272 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ATAD3BQ5T9A4 648 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 TTC23Q5W5X9 447 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 OR2T5Q6IEZ7 315 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 HMBOX1Q6NT76 420 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 DNAJC14Q6Y2X3 702 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ZDHHC21Q8IVQ6 265 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 D2HGDHQ8N465 521 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 OR2T29Q8NH02 315 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 NETO1Q8TDF5 533 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 KLHL6Q8WZ60 621 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 HOXB13Q92826 284 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GATA6Q92908 595 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 MS4A4EQ96PG1 132 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 FCRL4Q96PJ5 515 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 TRNT1Q96Q11 434 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 OR1F2PQ96R84 312 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 STACQ99469 402 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ACTRT3Q9BYD9 372 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ANKRD60Q9BZ19 345 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 CXorf36Q9H7Y0 433 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 FANCEQ9HB96 536 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 NDUFA13Q9P0J0 144 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ATG4BQ9Y4P1 393 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ORC6Q9Y5N6 252 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 IGHV1OR21-1A0A087WYE8 117 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 A0A0J9YVX5 310 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 G3V2T6 193 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF749O43361 778 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 ONECUT2O95948 504 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 CST1P01037 141 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 DCNP07585 359 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 HBQ1P09105 142 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 NCK1P16333 377 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 FPR1P21462 350 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 CERS1P27544 350 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 HMGA2P52926 109 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 HSD17B7P56937 341 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 YBX1P67809 324 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 MAP4K2Q12851 820 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 TRA2AQ13595 282 aaKnown RBP eCLIP6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 BLMHQ13867 455 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 DAG1Q14118 895 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 CYBRD1Q53TN4 286 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 SFT2D3Q587I9 215 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 FAM219BQ5XKK7 198 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 LPCAT4Q643R3 524 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC23A3Q6PIS1 610 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 CEACAM20Q6UY09 585 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 CYP4Z1Q86W10 505 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 RNF130Q86XS8 419 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 OR2L13Q8N349 312 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 DTWD2Q8NBA8 298 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 SUN3Q8TAQ9 357 aa6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 CIDECQ96AQ7 238 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 EXOSC8Q96B26 276 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-210ENST00000454859 ELP4Q96EB1 424 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms