RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 KDM1AO60341 852 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 GADD45GO95257 159 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 IFNW1P05000 195 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 PVRP15151 417 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 PCBP3P57721 371 aaKnown RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 KIAA1024LP59773 190 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 ABATP80404 500 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 C1orf61Q13536 156 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 GPR18Q14330 331 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 TMEM35AQ53FP2 167 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 ZC3H12BQ5HYM0 836 aaKnown RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 CRB2Q5IJ48 1285 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 FGD3Q5JSP0 725 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 ARMC8Q8IUR7 673 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 MAPKAP1Q9BPZ7 522 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 CTPS2Q9NRF8 586 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 OR6C2Q9NZP2 312 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 SEC14L3Q9UDX4 400 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 SNX7Q9UNH6 387 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 MTCH2Q9Y6C9 303 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 VCANP13611 3396 aa11.15□□□□□ -0.63
VTA1-203ENST00000452973 A0A1B0GVG6 124 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 TMEM247A6NEH6 219 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 MAN2B1O00754 1011 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 CELA2BP08218 269 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 ZNF888P0CJ79 500 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 POU1F1P28069 291 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 AKT2P31751 481 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 RYKP34925 604 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 MAP2K4P45985 399 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 PUM1Q14671 1186 aaKnown RBP eCLIP11.14□□□□□ -0.63
VTA1-203ENST00000452973 DEFB134Q4QY38 66 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 CCDC71Q8IV32 467 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 NLGN4XQ8N0W4 816 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 FAM160A2Q8N612 972 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 PROX1Q92786 737 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 TBC1D20Q96BZ9 403 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 NRBF2Q96F24 287 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 CNRIP1Q96F85 164 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 SCARF2Q96GP6 870 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 SLC35G5Q96KT7 338 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ZNF347Q96SE7 839 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ASB4Q9Y574 426 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ZNF860A6NHJ4 632 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 H3BMQ9 156 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 NOL3O60936 208 aaKnown RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 FAM20BO75063 409 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 INMTO95050 263 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 TFPTP0C1Z6 253 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 F3P13726 295 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ITGA2P17301 1181 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 OLR1P78380 273 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ILF3Q12906 894 aaKnown RBP eCLIP11.14□□□□□ -0.63
VTA1-203ENST00000452973 DGCR6Q14129 220 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ZIC1Q15915 447 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 FAHD1Q6P587 224 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ERI1Q8IV48 349 aaKnown RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 OR4N5Q8IXE1 308 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 FAM81AQ8TBF8 368 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 KAT2AQ92830 837 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 COG8Q96MW5 612 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 WFDC6Q9BQY6 131 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 RSPO3Q9BXY4 272 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 C2orf42Q9NWW7 574 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ADAM29Q9UKF5 820 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 ENTPD4Q9Y227 616 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 PCDHGA12O60330 932 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 DRD2P14416 443 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 NPTX1Q15818 432 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 SHISA5Q8N114 240 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 TOE1Q96GM8 510 aaKnown RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 C16orf58Q96GQ5 468 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 PIP5K1AQ99755 562 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 TREX2Q9BQ50 279 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 GPR174Q9BXC1 333 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 TPSD1Q9BZJ3 242 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 QRSL1Q9H0R6 528 aaKnown RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 C8orf33Q9H7E9 229 aaPredicted RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 ZNF556Q9HAH1 456 aa11.14□□□□□ -0.63
VTA1-203ENST00000452973 NDRG4Q9ULP0 352 aaKnown RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
VTA1-203ENST00000452973 APBB3O95704 486 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 HMGN2P05204 90 aaKnown RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 DDX5P17844 614 aaKnown RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 AHRP35869 848 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 LIM2P55344 173 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 LTB4RQ15722 352 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 MICAQ29983 383 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 TMEM236Q5W0B7 351 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 AHSA2Q719I0 299 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 CCDC80Q76M96 950 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 VN1R4Q7Z5H5 301 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 MFSD9Q8NBP5 474 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 ACER3Q9NUN7 267 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 SCN3BQ9NY72 215 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 SLCO1B1Q9Y6L6 691 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 ENPP4Q9Y6X5 453 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms