RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CDSNQ15517 529 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TAF13Q15543 124 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CA9Q16790 459 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MICBQ29980 383 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ANXA2RQ3ZCQ2 193 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CDKL4Q5MAI5 379 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 EOGTQ5NDL2 527 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CLVS2Q5SYC1 327 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF470Q6ECI4 717 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 HIST2H2AA3Q6FI13 130 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR2A2Q6IF42 318 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 RHBDD2Q6NTF9 364 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 DHRS13Q6UX07 377 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 WASH2PQ6VEQ5 465 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ARHGAP22Q7Z5H3 698 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMPRSS11BQ86T26 416 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 GGNQ86UU5 652 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMPRSS12Q86WS5 348 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CHSY1Q86X52 802 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CCDC50Q8IVM0 306 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 PQLC3Q8N755 202 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MAB21L3Q8N8X9 362 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 COLGALT1Q8NBJ5 622 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR5T1Q8NG75 326 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR10H4Q8NGA5 316 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR8J2Q8NGG1 315 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR4D6Q8NGJ1 314 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR1L4Q8NGR5 311 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 UBA3Q8TBC4 463 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 Q8TCH9 128 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CAPSLQ8WWF8 208 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CACNG8Q8WXS5 425 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 RPL3LQ92901 407 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CCDC124Q96CT7 223 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OPTNQ96CV9 577 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 RAB39BQ96DA2 213 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ASB9Q96DX5 294 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF512Q96ME7 567 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 VSTM2LQ96N03 204 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 WWC2-AS2Q96NR7 200 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TSSK2Q96PF2 358 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR14A2Q96R54 314 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF347Q96SE7 839 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CMKLR1Q99788 373 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 FRMD8Q9BZ67 464 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TSGA10Q9BZW7 698 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 SPRTNQ9H040 489 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 OPN3Q9H1Y3 402 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MSL2Q9HCI7 577 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CSNK1G1Q9HCP0 422 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 LYRM4Q9HD34 91 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MRPS30Q9NP92 439 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CCNB1IP1Q9NPC3 277 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 DYRK4Q9NR20 520 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 UFSP2Q9NUQ7 469 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MED17Q9NVC6 651 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MS4A12Q9NXJ0 267 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 SPHK1Q9NYA1 384 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 IFNKQ9P0W0 207 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 PIPOXQ9P0Z9 390 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF639Q9UID6 485 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ADAM21Q9UKJ8 722 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF490Q9ULM2 529 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 RPH3ALQ9UNE2 315 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CFL2Q9Y281 166 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TSC22D4Q9Y3Q8 395 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 KLK4Q9Y5K2 254 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPIAL4EA0A075B759 164 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 A0A096LPK6 155 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 A0A1W2PPK0 400 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 A8MUA0 341 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 F8VVB4 439 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 F8VWA3 439 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 M0R296 226 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 RAD51BO15315 384 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 SCO2O43819 266 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR10H2O60403 315 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 SCN2BO60939 215 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 LDB3O75112 727 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 RNF8O76064 485 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMCC1O94876 653 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 GOT2P00505 430 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CST1P01037 141 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPIAL4FP0DN26 164 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ACADSP16219 412 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 NAGAP17050 411 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 POLR2CP19387 275 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 IL32P24001 234 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 HRH2P25021 359 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PDHA2P29803 388 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CHRNA5P30532 468 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 HNRNPH3P31942 346 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 OTX1P32242 354 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ARRB1P49407 418 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CDC34P49427 236 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CXCR3P49682 368 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PSMC5P62195 406 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CSNK1G2P78368 415 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms