RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZNF354BQ96LW1 612 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 MFRPQ9BY79 579 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 FIS1Q9Y3D6 152 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 CCL27Q9Y4X3 112 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 PCDHA9Q9Y5H5 950 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 DNAJC15Q9Y5T4 150 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 CLCA3PQ9Y6N3 262 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 TMEM120BA0PK00 339 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 C1orf226A1L170 272 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 NPIPB8E9PQR5 432 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 SLC28A1O00337 649 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 PCDH7O60245 1069 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 RSL1D1O76021 490 aaKnown RBP18.6■□□□□ 0.57
COL9A3-202ENST00000452372 SERPINE1P05121 402 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 UQCRHP07919 91 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 TNNI3P19429 210 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 PRPH2P23942 346 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 TIA1P31483 386 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL9A3-202ENST00000452372 TAS2R50P59544 299 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 INPP5JQ15735 1006 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-202ENST00000452372 CHI3L2Q15782 390 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 UGT3A2Q3SY77 523 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 CES4AQ5XG92 561 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 KIF2BQ8N4N8 673 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 MORN4Q8NDC4 146 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 OR14A16Q8NHC5 309 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 METTL2AQ96IZ6 378 aaKnown RBP18.6■□□□□ 0.57
COL9A3-202ENST00000452372 DGAT2Q96PD7 388 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 VIPAS39Q9H9C1 493 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 STMN3Q9NZ72 180 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 LUZP4Q9P127 313 aa18.6■□□□□ 0.57
COL9A3-202ENST00000452372 C17orf105B2RV13 164 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 TMEM114B3SHH9 223 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 RGS14O43566 566 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 GP1BBP13224 206 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 COX7A2P14406 83 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 ALOX15P16050 662 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-202ENST00000452372 GRK2P25098 689 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 CLCN2P51788 898 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 WDR4P57081 412 aaKnown RBP18.59■□□□□ 0.57
COL9A3-202ENST00000452372 PLEKHN1Q494U1 663 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-202ENST00000452372 ACER2Q5QJU3 275 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 SH2D4BQ5SQS7 431 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 ABHD17BQ5VST6 288 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 HHATQ5VTY9 493 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 SLC6A19Q695T7 634 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 Q6ZS92 163 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 Q6ZSR9 355 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 CRLF3Q8IUI8 442 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 ST13P4Q8IZP2 240 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-202ENST00000452372 SLC5A8Q8N695 610 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 ANKRD42Q8N9B4 389 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 OR4K14Q8NGD5 310 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 FAM76AQ8TAV0 307 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 HAS2Q92819 552 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 PNPLA2Q96AD5 504 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 ARL8AQ96BM9 186 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 VMP1Q96GC9 406 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 PELOQ9BRX2 385 aaKnown RBP18.59■□□□□ 0.57
COL9A3-202ENST00000452372 RNF32Q9H0A6 362 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 TUBB1Q9H4B7 451 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 ZDHHC2Q9UIJ5 367 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 CES1P1Q9UKY3 287 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 B3GNT3Q9Y2A9 372 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 CROCCQ5TZA2 2017 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 TEX15Q9BXT5 2789 aa18.59■□□□□ 0.57
COL9A3-202ENST00000452372 GNG14A0A1W2PPG7 69 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 TMEM233B4DJY2 109 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 VPS4BO75351 444 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 HSPA4LO95757 839 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 ANXA4P09525 319 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-202ENST00000452372 SLC35E2P0CK97 266 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 PIK3R1P27986 724 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 GSTM5P46439 218 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 PLIN5Q00G26 463 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 MEP1AQ16819 746 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 FCRLBQ6BAA4 426 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 SLC48A1Q6P1K1 146 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 RPS19BP1Q86WX3 136 aaKnown RBP18.58■□□□□ 0.56
COL9A3-202ENST00000452372 LGI4Q8N135 537 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 C16orf78Q8WTQ4 265 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 TWIST2Q8WVJ9 160 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 NCLNQ969V3 563 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 PPWD1Q96BP3 646 aaKnown RBP18.58■□□□□ 0.56
COL9A3-202ENST00000452372 NPAS2Q99743 824 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 PAIP2Q9BPZ3 127 aaKnown RBP18.58■□□□□ 0.56
COL9A3-202ENST00000452372 FAIM2Q9BWQ8 316 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 DEFB126Q9BYW3 111 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 PLA2G3Q9NZ20 509 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 VPS4AQ9UN37 437 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 DLGAP4Q9Y2H0 992 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 PTGDR2Q9Y5Y4 395 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 NOTCH2Q04721 2471 aa18.58■□□□□ 0.56
COL9A3-202ENST00000452372 POLEQ07864 2286 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 TRBV11-1A0A0K0K1C0 115 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 DYTNA2CJ06 578 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 ITM2AO43736 263 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 SEC22BO75396 215 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 SNUPNO95149 360 aaKnown RBP18.57■□□□□ 0.56
COL9A3-202ENST00000452372 DDAH2O95865 285 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms