RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TRIM40Q6P9F5 258 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 TSEN54Q7Z6J9 526 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 RNF130Q86XS8 419 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 NAXDQ8IW45 347 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 DEFB124Q8NES8 71 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 OR5AK3PQ8NH89 298 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 LMX1AQ8TE12 382 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 RHBDD1Q8TEB9 315 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 CREB3L4Q8TEY5 395 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 FBLIM1Q8WUP2 373 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ITFG2Q969R8 447 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ZNF764Q96H86 408 aaPredicted RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 MPP4Q96JB8 637 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 QRFPRQ96P65 431 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 TMEM121BQ9BXQ6 578 aaPredicted RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 AICDAQ9GZX7 198 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 RAD21L1Q9H4I0 556 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 MVB12BQ9H7P6 319 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 CXorf36Q9H7Y0 433 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 SLAMF7Q9NQ25 335 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ADAM29Q9UKF5 820 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 BAG5Q9UL15 447 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 GPSM3Q9Y4H4 160 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ORC6Q9Y5N6 252 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 OR52A4PA6NMU1 304 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 MYO1GB0I1T2 1018 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 FLRT2O43155 660 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 AQP9O43315 295 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 B4GAT1O43505 415 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 PRICKLE3O43900 615 aaPredicted RBP10.15□□□□□ -0.78
PKP4-206ENST00000452162 TMPRSS11DO60235 418 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 CLEC3AO75596 197 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 KRT75O95678 551 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 TNFP01375 233 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 GIMD1P0DJR0 217 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 ARAFP10398 606 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 UQCRC2P22695 453 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 PCSK6P29122 969 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 CHI3L1P36222 383 aaPredicted RBP10.15□□□□□ -0.78
PKP4-206ENST00000452162 POLR2IP36954 125 aaKnown RBP10.15□□□□□ -0.78
PKP4-206ENST00000452162 BLKP51451 505 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 ISL1P61371 349 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 SELENOWP63302 87 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 CD47Q08722 323 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 RPE65Q16518 533 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 C6orf141Q5SZD1 244 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 NUDT13Q86X67 352 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 EID2Q8N6I1 236 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 PIK3C3Q8NEB9 887 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 OR52E1Q8NGJ3 308 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 NFKBIDQ8NI38 313 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 RGMAQ96B86 450 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 TAMM41Q96BW9 452 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 TMEM168Q9H0V1 697 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 ABCG4Q9H172 646 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 PCOLCE2Q9UKZ9 415 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 SAMHD1Q9Y3Z3 626 aaKnown RBP10.15□□□□□ -0.78
PKP4-206ENST00000452162 MAP4K5Q9Y4K4 846 aa10.15□□□□□ -0.78
PKP4-206ENST00000452162 TRBC2A0A5B9 178 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 PDZK1P1A8MUH7 402 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 BCKDKO14874 412 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 CBFA2T3O75081 653 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 CPNE6O95741 557 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 CTSEP14091 401 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 SDHBP21912 280 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 RYKP34925 604 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 SOAT1P35610 550 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 FRKP42685 505 aaPredicted RBP10.15□□□□□ -0.79
PKP4-206ENST00000452162 GRK6P43250 576 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 GSTM5P46439 218 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 ARHGDIAP52565 204 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 PMS2P3Q13401 168 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 MEP1AQ16819 746 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 ZNF630Q2M218 657 aaPredicted RBP10.15□□□□□ -0.79
PKP4-206ENST00000452162 FAHD1Q6P587 224 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 KCTD8Q6ZWB6 473 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 GALNT5Q7Z7M9 940 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 PLD3Q8IV08 490 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 NATD1Q8N6N6 113 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 CCL4L1Q8NHW4 92 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 OR5P2Q8WZ92 322 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 EPYCQ99645 322 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 DDX31Q9H8H2 851 aaKnown RBP10.15□□□□□ -0.79
PKP4-206ENST00000452162 REEP1Q9H902 201 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 POLR1BQ9H9Y6 1135 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 SLC6A20Q9NP91 592 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 PRDM8Q9NQV8 689 aa10.15□□□□□ -0.79
PKP4-206ENST00000452162 PDP1Q9P0J1 537 aaPredicted RBP10.15□□□□□ -0.79
PKP4-206ENST00000452162 SCHIP1Q9P0W5 487 aaPredicted RBP10.15□□□□□ -0.79
PKP4-206ENST00000452162 PRAMEF33A0A0G2JMD5 474 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 PDPK1O15530 556 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 C9P02748 559 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 OPN1SWP03999 348 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 JUNBP17275 347 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 PEBP1P30086 187 aaKnown RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 ID4P47928 161 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 PRIM2P49643 509 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 TPD52P55327 224 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 PCBP3P57721 371 aaKnown RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 PCBP4P57723 403 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms