RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 PCNX1Q96RV3 2341 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 A0A1B0GTH9 108 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 PINLYPA6NC86 204 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 A8MT66 165 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 ZNF354AO60765 605 aaPredicted RBP16.39■□□□□ 0.21
DDX56-207ENST00000448192 PDE9AO76083 593 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 SEMA3DO95025 777 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 AIFM1O95831 613 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 IGKV3-11P04433 115 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 ABHD2P08910 425 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 RHOXF2BP0C7M4 288 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 TSPAN8P19075 237 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 GCAP28676 217 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 SMSP52788 366 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 CDH13P55290 713 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 HERVK_113P63132 956 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 ERVK-8P63133 956 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 PLGLB1Q02325 96 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 ZNF267Q14586 743 aaPredicted RBP16.39■□□□□ 0.21
DDX56-207ENST00000448192 CMPK2Q5EBM0 449 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 XKRXQ6PP77 449 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 OPN5Q6U736 354 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 C3P1Q6ZMU1 363 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 BNC2Q6ZN30 1099 aaPredicted RBP16.39■□□□□ 0.21
DDX56-207ENST00000448192 RTL4Q6ZR62 310 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 TRMT10CQ7L0Y3 403 aaKnown RBP16.39■□□□□ 0.21
DDX56-207ENST00000448192 FGD2Q7Z6J4 655 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 DOLPP1Q86YN1 238 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 UCN3Q969E3 161 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 FBXL20Q96IG2 436 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 PHF12Q96QT6 1004 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 RHOXF2Q9BQY4 288 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 PELOQ9BRX2 385 aaKnown RBP16.39■□□□□ 0.21
DDX56-207ENST00000448192 ERVK-6Q9BXR3 956 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 DEFB127Q9H1M4 99 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 ELOVL6Q9H5J4 265 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 PPT2Q9UMR5 302 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 ERVK-19Q9WJR5 959 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 MEMO1Q9Y316 297 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 NCOA6Q14686 2063 aaPredicted RBP16.39■□□□□ 0.21
DDX56-207ENST00000448192 NOTCH2Q04721 2471 aa16.39■□□□□ 0.21
DDX56-207ENST00000448192 A0A0G2JMM0 328 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 IQANK1A0A1B0GTG1 560 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 A0A1W2PPB8 328 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 A0A1W2PRS3 328 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 KIR3DP1A8MWS1 328 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 PPP6CO00743 305 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 RIPK2O43353 540 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 HNRNPRO43390 633 aaKnown RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 OTCP00480 354 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 KLK1P06870 262 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 RPS17P08708 135 aaKnown RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 SBK3P0C264 359 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 GRNP28799 593 aaKnown RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 PTGS2P35354 604 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 PPIAP62937 165 aaKnown RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 ADGRD1Q6QNK2 874 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 NCCRP1Q6ZVX7 275 aaPredicted RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 C9orf40Q8IXQ3 194 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 TMEM151AQ8N4L1 468 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 OR52N2Q8NGI0 321 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 ZNF483Q8TF39 744 aaPredicted RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 RIT1Q92963 219 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 MARVELD3Q96A59 401 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 MTBPQ96DY7 904 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 MRPL1Q9BYD6 325 aaKnown RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.38■□□□□ 0.21
DDX56-207ENST00000448192 TEX10Q9NXF1 929 aaPredicted RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 AHSPQ9NZD4 102 aa16.38■□□□□ 0.21
DDX56-207ENST00000448192 KLF2Q9Y5W3 355 aaPredicted RBP16.38■□□□□ 0.21
DDX56-207ENST00000448192 A0A1B0GTL3 188 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 FAM166BA8MTA8 275 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 ACOT7O00154 380 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 PGRMC2O15173 223 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 TPOP07202 933 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 FAM153BP0C7A2 387 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 TAC1P20366 129 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 CNR1P21554 472 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 PIK3R1P27986 724 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 HTR1EP28566 365 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 MPEG1Q2M385 716 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 FAM153CQ494X1 144 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 GGTA1PQ4G0N0 100 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 PIGGQ5H8A4 983 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 CCNYL2Q5T2Q4 361 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 C10orf62Q5T681 223 aaPredicted RBP16.37■□□□□ 0.21
DDX56-207ENST00000448192 OR52E8Q6IFG1 317 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 LETMD1Q6P1Q0 360 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 RNF111Q6ZNA4 994 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 TIFABQ6ZNK6 161 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 FAM47EQ6ZV65 393 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 SLC29A4Q7RTT9 530 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 NUBPLQ8TB37 319 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 SLC22A8Q8TCC7 542 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 TRIM44Q96DX7 344 aaPredicted RBP16.37■□□□□ 0.21
DDX56-207ENST00000448192 SGCZQ96LD1 299 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 GAL3ST4Q96RP7 486 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 FARSBQ9NSD9 589 aaKnown RBP16.37■□□□□ 0.21
DDX56-207ENST00000448192 SACM1LQ9NTJ5 587 aa16.37■□□□□ 0.21
DDX56-207ENST00000448192 SLC12A4Q9UP95 1085 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms