RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GJA1P17302 382 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 PTNP21246 168 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 FGL1Q08830 312 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 RCAN2Q14206 197 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 FLYWCH1Q4VC44 716 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 ENPP6Q6UWR7 440 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 CYP4V2Q6ZWL3 525 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-204ENST00000448183 KLBQ86Z14 1044 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 BEST3Q8N1M1 668 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 TEX26Q8N6G2 289 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 NLGN2Q8NFZ4 835 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 SUN3Q8TAQ9 357 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 THAP4Q8WY91 577 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 RGCCQ9H4X1 137 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 B3GAT2Q9NPZ5 323 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 TDP1Q9NUW8 608 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 VNN3Q9NY84 501 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 KLRF1Q9NZS2 232 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 PCDH10Q9P2E7 1040 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 CAMTA1Q9Y6Y1 1673 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 B4DGG1 531 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 H7C417 338 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 FDXRP22570 491 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 OC90Q02509 493 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-204ENST00000448183 POU4F2Q12837 409 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 WDTC1Q8N5D0 677 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 GALNT11Q8NCW6 608 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 RAD9AQ99638 391 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 DPH2Q9BQC3 489 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-204ENST00000448183 C11orf84Q9BUA3 381 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-204ENST00000448183 MROQ9BYG7 248 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 ATG5Q9H1Y0 275 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 RETREG1Q9H6L5 497 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 GPR83Q9NYM4 423 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 PLAGL1Q9UM63 463 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 PCDHGA2Q9Y5H1 932 aa7.46□□□□□ -1.22
NEDD9-204ENST00000448183 PARP4Q9UKK3 1724 aaKnown RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CD8B2A6NJW9 211 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 MUSKO15146 869 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 RNF13O43567 381 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 FMO6PO60774 539 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 RGS9O75916 674 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PLGP00747 810 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TNFP01375 233 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 FHP07954 510 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SPARCP09486 303 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CD8BP10966 210 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 NDUFV2P19404 249 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 NAA10P41227 235 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 MECP2P51608 486 aaKnown RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 NKX2-5P52952 324 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PITX1P78337 314 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 RELAQ04206 551 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 RING1Q06587 406 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 AADACL4Q5VUY2 407 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF783Q6ZMS7 281 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SSX6Q7RTT6 188 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF280BQ86YH2 543 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 KDM1BQ8NB78 822 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 GATA6Q92908 595 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 NECAB3Q96P71 396 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 HDHD5Q9BXW7 423 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 MARCH4Q9P2E8 410 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 EPHA6Q9UF33 1036 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ACSL6Q9UKU0 697 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ACSL5Q9ULC5 683 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM98Q9Y2Y6 226 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 Q9Y3F1 56 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TRBV2A0A0J9YWF9 115 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 A0A1W2PPK0 400 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF705EA8MWA4 302 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 M0R129 80 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 EMC8O43402 210 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TYRP14679 529 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CD9P21926 228 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ACVR1BP36896 505 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PRKXP51817 358 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CDKN2DP55273 166 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ACTA2P62736 377 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ACTG2P63267 376 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 GNMTQ14749 295 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ALG10BQ5I7T1 473 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 C6orf120Q7Z4R8 191 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF709Q8N972 641 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CHDHQ8NE62 594 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 OR52B6Q8NGF0 335 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF461Q8TAF7 563 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SLC6A7Q99884 636 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ACOT13Q9NPJ3 140 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 WASF3Q9UPY6 502 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 HYKKA2RU49 373 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 H3BMQ9 156 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 BCAS1O75363 584 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CFL1P23528 166 aaKnown RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CHMP24386 653 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 OXTRP30559 389 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 OPRL1P41146 370 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 MTNR1AP48039 350 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SH3BP2P78314 561 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 MS4A2Q01362 244 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms